Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02967 ATGAAGAGAATGGCATGTTCCTTCCCTGAGGAGGTCCTCGAGCACGTTTTCTCGTTCATTCAGTCTGACAGAGACCGAAACGCGATCTCTTTGGTTTGTAAGTCATGGTACGAGATTGAACGATGGTGCAGGAAGAGGATTTTCATTGGGAACTGCTATGCCGTGAGCCCTGTGATGGTGATCAAACGGTTCCGGGATGTGAGATCGATTGCGCTCAAAGGAAAGCCTCACTTTGCGGACTTCAATTTGGTGCCAGAGGGTTGGGGTGGTTATGTGTACCCTTGGATCGTAGCTGTGGCTGGAGCTTATCCCTGGTTAGAGGAGATCAGACTCAAGAGGATGGTCATAACGGACGAGAGTTTGGAGTTGATCGCTAAATCCTTTAAAAACTTCAAAGTCTTAGTGCTGTCTTCCTGTGAGGGATTCAGTACTGATGGACTCGCTGCCATTGCCGCCAATTGCAGGAATTTGAGAGAATTGGACTTGCGGGAGAGTGAAGTAGATGAACTTAGTGGGCATTGGCTAAGCCAGTTTCCCGATTCATACACGTCATTAGTTTCTCTCAATATCGCATGCTTAGGCACTGAGCTGAATTTCTCTGCACTAGAGCGCCTTGTTGGGAGATGCTCCAACCTGCAAACTCTCCGCCTTAACCGTGCTGTGCCCCTTGATAAGCTGGCCAACCTTCTTCGCCGGGCACCTCAGCTGATTGAGTTAGGCACAGGAGTCTACTCAAGTGAGATGCGACCCGAGGTCTTCACAAACCTATCTACAGCTTTTTCTGGATGTAAGCAATTGAGGGGCTTGTCTGGCTTCTGGGATGTGCTCCCATCTTTCCTTCCAGCTGTCTATCCTATCTGCCCCAAGTTAACTTCTCTGAACTTGAGTTATGCTACAGTTCAAAGCCCAGATCTTATCAAGCTTGTCAGTCAGTGTCAGAATTTGCAGCGTTTATTGGTTCTGGATTACATAGAAGACGCTGGCCTTGAGGCCCTTGCTGCATCATGCAAAGATCTTAGGGAATTGAGAGTGTTTCCATCTGATCCTTTTGTGTTAGAACCAAATGTAGAATTGACAGAACAGGGGCTTGTCTCGGTGTCTGAAGGCTGCCCCAAGCTGCAGTCAGTTCTATATTTTTGTCGTCAAATGTCAAATGCTGCCCTAATTACTATTGCCCGTAACAGGCCTAATATGACTCGTTTTCGCCTTTGTATTATTGAGCCTCAAAGTCCCGACTACCTTACCCTTGAACCGCTGGATGTTGGTTTTGGAGCTATTGTTGAGCATTGCAGGGATCTTCGGCGCTTGTCCATGTCTGGTCTTCTAACTGATCGTGTTTTTGAGTATATTGGAACTTTTGCGAAGAAGCTGGAGATGCTTTCTGTGGCTTTTGCTGGAGAGAGTGATTTGGGGCTCCATCATATTTTGTCAGGGTGTGAGAGCCTTAGGAAGCTGGAGATCAGGGACTGCCCGTTTGGTGATAAGGCCCTCTTGGCTAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTTGGTGAGTTATGGAGCATGTAAGCTGCTGGGTCAGAAAATGCCCAGACTCAATGTTGAAGTCATTGATGAGAGGGGACCTCCAGAATCAAGGCCAGATAGTTGTCCTGTTGAGAAGCTCTACGTATACAGGACTATTGCTGGGCCAAGATTGGACATGCCCGATTTTGTGTGGACAATGGAAGACGATCCTGCATTGAGGCCTTCTTG 1754 0.4778 MKRMACSFPEEVLEHVFSFIQSDRDRNAISLVCKSWYEIERWCRKRIFIGNCYAVSPVMVIKRFRDVRSIALKGKPHFADFNLVPEGWGGYVYPWIVAVAGAYPWLEEIRLKRMVITDESLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAANCRNLRELDLRESEVDELSGHWLSQFPDSYTSLVSLNIACLGTELNFSALERLVGRCSNLQTLRLNRAVPLDKLANLLRRAPQLIELGTGVYSSEMRPEVFTNLSTAFSGCKQLRGLSGFWDVLPSFLPAVYPICPKLTSLNLSYATVQSPDLIKLVSQCQNLQRLLVLDYIEDAGLEALAASCKDLRELRVFPSDPFVLEPNVELTEQGLVSVSEGCPKLQSVLYFCRQMSNAALITIARNRPNMTRFRLCIIEPQSPDYLTLEPLDVGFGAIVEHCRDLRRLSMSGLLTDRVFEYIGTFAKKLEMLSVAFAGESDLGLHHILSGCESLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPRLNVEVIDERGPPESRPDSCPVEKLYVYRTIAGPRLDMPDFVWTMEDDPALRPS 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02967 584 Pfam Transport inhibitor response 1 protein domain 66 111 IPR041101 -
Bva04g02967 584 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 5 575 - -
Bva04g02967 584 SUPERFAMILY F-box domain 7 40 IPR036047 GO:0005515
Bva04g02967 584 SMART LRR_CC_2 103 127 IPR006553 -
Bva04g02967 584 SMART LRR_CC_2 287 311 IPR006553 -
Bva04g02967 584 SMART LRR_CC_2 370 394 IPR006553 -
Bva04g02967 584 SMART LRR_CC_2 430 453 IPR006553 -
Bva04g02967 584 SMART LRR_CC_2 479 503 IPR006553 -
Bva04g02967 584 SMART LRR_CC_2 312 335 IPR006553 -
Bva04g02967 584 SMART LRR_CC_2 128 153 IPR006553 -
Bva04g02967 584 Pfam F-box 6 46 IPR041567 -
Bva04g02967 584 Gene3D Ribonuclease Inhibitor 45 575 IPR032675 -
Bva04g02967 584 PANTHER PROTEIN TRANSPORT INHIBITOR RESPONSE 1 5 575 - -
Bva04g02967 584 SUPERFAMILY RNI-like 67 533 - -
Bva04g02967 584 Gene3D - 1 44 - -
Bva04g02967 584 SMART fbox_2 8 49 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02967 Bva-Chr4 24983071 24986882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02967 K14485 - jre:108997972 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02967 04 24983071 24986882 Bva13g02915 13 21027791 21031347 BWGD