Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02787 ATGAGGACTTTCTTCACCTCAGAATCCTGTAAAGACGCACACCCAAATGCTCTAAATCCGCAGTCCTGGCTCCAAgttgaaagaggaaaaattcCCAAACTGTCGTCACAGTACTCTTCGGCATCAATAGAATCTCTAATCAAGGTGCCAGAGCCGTCTATACTCCCATTCTTTAAACCTATTGATTATGTGGAAGTTTTAGCTCAAATCCACGAAGAACTAGAGTCATGTCCGCCACAAGAGCGGTCAAATATCTGTTTGTTACAATTCCAGGTATTTAGAGGCCTTggagaatttaaattgatgCGTAGAAGCCTCAGGGCAGCATGGCAGAGAGCCAACAGTGTTCATGAGAAGCTTGTATTTGGGGCGTGGTTGAAGTATGAGAAGCAAGGGGAAGAGCTTATAGCTGACTTGTTGGCAACTTGTGGTAAATGTGCAGAGGAATTTGGGCCCATAGATGTAGCATCTCATCTTCCTTTTGCTGTAAATGTAAGTTCCCaggaaagaaatttgatgaatGGGAACCACATTTCAAGAAATGTTATATTTACGATtggaaatgagaaaataatttgtgataGACAAAGGATTTCTGAACTTTCAGCACCATTTCATGCAATGCTCAAGGGGTATTTCAGTGAATCACATTCTGAGACTATAGATTTGTCTGCAAACAATATCTCTCCTTCAGGTCTGAGGGCAATAAGAGATTTCAGTTTGACAGGAAATCTGCACGATGTCCCTCCAAATCTTTTGTTGGAGATATTAGTTTTTGCAAACAAGTATTGTTGTGAAGGACTCAAAGATGCTTGTGATAGGAAACTCGCATCTTTAGTTTCATCCAAAGAGGATGCTGTGGAGCTCATCGAATATGCTCTTGAAGAGAATTCTTCTGTCCTTGCCGCATCTTGTTTGCAAGTCCTTTTACGTGATCTTCCAAACTGTTTGAATGACAACCGGGTGGTGGAGATATTTATTCATGCTAATAGGCAACAGCTAGCAGTCATGGTTGGGCCAGTTTTATATTCACTTTACTGTTTATTAAGTGAAGTTTCTATGAACCTTAATCCTATGTCAGATAGAACAGCTCATTTCCTGGAACGGTTAGTTGATTTTGCTGAAACTGACAAGCAGAGATTGCTGGCTTTTCATCAATTGGGATGTGTGAGACTCTTAAGGAAAGAATATGATGAAGCCCGTCGCCTTTTTGAGGCGGCTGTAAATGCGGGCCATGTTTATTCTGTTGCTGGTTTAGCTAGGCTGGATTATATAAATGGTGAGAAGCTTGCATCTTATGAGAGACTCAGCTCACTCGTTTCCTCTGGCACTCCCCTTGGATGGATCTACCAGGAAAGATCAATATATTGTGAAGGTGATAACAGATGGGACGACCTTGAGAAAGCAACTGATCTTGACCCTACTCTTATATATCCCTACATGTATAGAGCTGCTTCTTTAATGAGGACACAGAATGTTCAAGCTGCACTTGCAGAAATCAATCGTATTCTTGGATTCAAACTTTCATTAGAATGCTTGGAACTACGGTTTTGTTTCTACCTGGTTCTCGAGGACTACAAAGCAGCCCTCTGTGATGTTCAAGCAATTCTTACACTCTCTCCAGATTACAGAATGTTTGAGGGGAGGGTGGCTGCATCCCAACTCCGTACTCTTGTGCGTGAGCATGTTGAACATTGGACAACAGCAGATTGTTGGGGGAAACTGTATGATTGTTGGTCTGCAGTTGATGATATTGGCTCTCTCTCTGTTATCTACCAGATGCTCGAATCTGATGCAGCAAAAGGTGTTCTACACTTTAGACAGTCCTTGCTTCTCCTAAGgcTGAACTGTCCTGAGTCAGCTATGCGAAGTTTACAATTAGCTCGCCAAAATGCATCCAGTGAGCATGAACGGCTGGTATATGAAGGGTGGATATTGTATGATACAGGTCATTATGAGGAAGGGCTTCGAAAAGCTGAAGAGTCTATTTGCATCAAAAGGTCCTTTGAGGCCTTCTTCCTTAAGGCCTATGCATTGGCTGACTCAAGTCTAGATTCATCATGTTCTTCAACTGTTATTTCACTTCTTGAAAGTGCTTTGAAGTGTCCTTCAGATAATCTGCGTAAAGGTCAGGCCCTGAACAATCTTGGAAGTGTTTACGTTGACTGTGGGAAATTGGACGCAGCAGCTGATTGCTATATCAGTGCTCTCCAAATCCGGCACACCCGAGCTCATCAGGGTCTTGCACGGGTTCATTTTCTCAGAAATGATAAGGCTGCTGCCTATGATGAAATGACCAAACTTATCCAGAAGGCAAAAAACAATGCATCTGCATATGAGAAAAGGTCTGAGTATTGTGATCGTGAACTCACCAAGGCAGATTTGGAGATGGTGACTCGATTAGATCCACTTAGGGTGTATCCTTACAGATATCGAGCTGCAGTGTTGATGGACAACCACAAAGAACAGGAAGCCATCGCTGAACTCTCCAGAGCAATTGCATTTAAAGCTGATCTACACTTGTTACATCTACGTGCTGCATTCCATGAACACACTGGGGATGTCTTAGGTGCCTTAAGGGACTGTCGAGCTGCACTCTCAGTGGACCCAAACCATCAAGAAATGTTGGAACTTCACAGCCGTGTAAATAGCCATGAACCGTG 2663 0.4176 MRTFFTSESCKDAHPNALNPQSWLQVERGKIPKLSSQYSSASIESLIKVPEPSILPFFKPIDYVEVLAQIHEELESCPPQERSNICLLQFQVFRGLGEFKLMRRSLRAAWQRANSVHEKLVFGAWLKYEKQGEELIADLLATCGKCAEEFGPIDVASHLPFAVNVSSQERNLMNGNHISRNVIFTIGNEKIICDRQRISELSAPFHAMLKGYFSESHSETIDLSANNISPSGLRAIRDFSLTGNLHDVPPNLLLEILVFANKYCCEGLKDACDRKLASLVSSKEDAVELIEYALEENSSVLAASCLQVLLRDLPNCLNDNRVVEIFIHANRQQLAVMVGPVLYSLYCLLSEVSMNLNPMSDRTAHFLERLVDFAETDKQRLLAFHQLGCVRLLRKEYDEARRLFEAAVNAGHVYSVAGLARLDYINGEKLASYERLSSLVSSGTPLGWIYQERSIYCEGDNRWDDLEKATDLDPTLIYPYMYRAASLMRTQNVQAALAEINRILGFKLSLECLELRFCFYLVLEDYKAALCDVQAILTLSPDYRMFEGRVAASQLRTLVREHVEHWTTADCWGKLYDCWSAVDDIGSLSVIYQMLESDAAKGVLHFRQSLLLLRLNCPESAMRSLQLARQNASSEHERLVYEGWILYDTGHYEEGLRKAEESICIKRSFEAFFLKAYALADSSLDSSCSSTVISLLESALKCPSDNLRKGQALNNLGSVYVDCGKLDAAADCYISALQIRHTRAHQGLARVHFLRNDKAAAYDEMTKLIQKAKNNASAYEKRSEYCDRELTKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEQEAIAELSRAIAFKADLHLLHLRAAFHEHTGDVLGALRDCRAALSVDPNHQEMLELHSRVNSHEP 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02787 887 Gene3D Tetratricopeptide repeat domain 343 547 IPR011990 GO:0005515
Bva13g02787 887 SMART BTB_4 180 280 IPR000210 GO:0005515
Bva13g02787 887 SMART tpr_5 839 872 IPR019734 GO:0005515
Bva13g02787 887 SMART tpr_5 381 414 IPR019734 GO:0005515
Bva13g02787 887 SMART tpr_5 710 743 IPR019734 GO:0005515
Bva13g02787 887 ProSiteProfiles TPR repeat profile. 710 743 IPR019734 GO:0005515
Bva13g02787 887 Pfam Tetratricopeptide repeat 712 741 - -
Bva13g02787 887 Gene3D Tetratricopeptide repeat domain 789 886 IPR011990 GO:0005515
Bva13g02787 887 Coils Coil 390 410 - -
Bva13g02787 887 PANTHER ETO1-RELATED 1 887 IPR044631 GO:0010105
Bva13g02787 887 Gene3D Tetratricopeptide repeat domain 602 788 IPR011990 GO:0005515
Bva13g02787 887 SUPERFAMILY TPR-like 693 878 IPR011990 GO:0005515
Bva13g02787 887 SUPERFAMILY POZ domain 171 277 IPR011333 -
Bva13g02787 887 PANTHER ETO1-LIKE PROTEIN 1 1 887 - -
Bva13g02787 887 Coils Coil 762 782 - -
Bva13g02787 887 SUPERFAMILY TPR-like 382 739 IPR011990 GO:0005515
Bva13g02787 887 Gene3D Potassium Channel Kv1.1; Chain A 170 320 IPR011333 -
Bva13g02787 887 Pfam BTB/POZ domain 181 276 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02787 Bva-Chr13 20363719 20368563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02787 711 874 Glycosyltransferase AT3G04240 27.011 9.72e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02787 - - gmx:100793740 1485.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02850 04 24423818 24428691 Bva13g02787 13 20363719 20368563 BWGD