Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02850 ATGAGGACTTTCTTCACCTCAGAATCCTACAAAGACGCAGACCCAAATGCTCTAAATCCACAGTCCTGTCTCCAAgttgaaagaggaaaaattcCCAAACTGTCGTCACAGTACCCTTCAGCATCAATAGAGTCTCTGATCAAGGTCCAAGAGCCTTCTATACTCCCATTCTTTAAACCTATTGATTATGTTGAAGTTTTAGCTCAAATCCACGAAGAACTAGATTCATGTCCACCACAAGAGCAGTCAAATCTGTATTTATTACAATTCCAGGTCTTTAGAGGCCTTGgggaatttaaattaatgcgCAGAAGCCTTAGGACAGCATGGCAGAGAGCCAACAGTATTCATGAGAAGCTTATATTTGGGGCATGGTTGAAGTATGAGAAGCAAGGGGAGGAACTTATAGCTGACTTGCTGACAACTTGTAGTAGATGTGCAGAGGAGTTTGGGCCCATAGATATAAcatcttattttccttttgctgtAAATGTAAGTTCCCAGGAAAGAGTTTTGATGAATGAGAActtcatttcaaaaaatgttatatttacgATTGGAAATGAGCAAATAATTTGTGATAGGCAAAAAATTTCTGAACTTTCAGCACCATTTCATGCAATGCTCAAGGGGTATTTTAGTGAATCACATTTGGAGACTATAGATTTGTCTGAAAACGACATCTCTCCTTCTGGTCTGAGGGCAATACGAGATTTCAGTTTAACAGGAAGTTTGCATGATGTTCCTCCAAATATTTTGTTGGAGATATTGGTTTTTGCAAACAAGTATTGTTGTGAAGGACTCAAAGATGCTTGTGATAGGAGACTGACATCTTTAGTTTCATCAAAAGAAGATGCTATGGAGCTCATTGAATATGCTCTTGAAGAGAATTCTCCTTTCCTTGCCGTGTCTTGTTTGCAAGTCCTTTTACGTGATCTGCCAAATTGTTTGAATGACAACCAAGTGGTGGAGATGTTTATTTCTGCTACTAGGCAAAAGCTAGCAGTCATGGTGGGGccagttttattttcattatactGTTTATTAAGTGAAGTTTCTATGAACCTTAACCCTACGTCAGATACAACAGCTCATTTCCTGGAACGGTTAGTTGATTTTGCTGAAACTGACAGGCAGAGACTGCTGGCTTTTCATCAATTGGGATGTGTAAGACTCTTAAGGAAAGAATATCATGAAGCTCGCCGCCTTTTTGAGGTGGCTGTAAATGCAGGCCATATTTATTCTGTTGTTGGTTTAGCTAGACTGGATTATATAAATGGTGAGAAGCTTCTATCTTATGAGAAGCTCAGCTCAATCATTTCCTCTAGTACTCCACTTGGATGGATGTACCAGGAAAGATCAATATATTGTGAAGGTGATGACAGGTGGGACGACCTCAAGAAAGCAACTGACCTTGATCCTACACTTATATATCCCTACATGTATAGGGCTGCTTCTTTAATGAGGTCACAGGATGTTCAAGCTGCACTGGCTGAAATCAATCGCATTCTTAGATTCAAACTTTCATTAGAATGCTTAGAACTACGGTTTTGTTTCTATCTGGTTCTTGAGGACTACAAATCAGCTCTCTGTGATGTTCAAGCAATTCTTACACTCTGTCCAAATTACAGAATGTTTGAGGGGAGGGTGGCTGCATCCCAACTCTGTACTCTTGTGCGTGAGCATGTTGAACATTTGACAACAGCAGATTGTTGGGGGAAACTGTATGATTGTTGGTCCGCAGTTGATGATATTGGCTCTCTCTCTGTTATATATCAGATGCTCGATTCTGATGCTGCAAAAGGTGTTCTACACTTCAGGCAGTCATTGCTTCTCCTAAGGCTGAACTGTCCTGAGGCAGCTATACGAAGTTTACAGTTAGCTCGCCAGCATGCATCCAGTGAACATGAGCGGCTGGTGTATGAGGGGTGGATATTGTATGATACAGGTCATTATGAGGAAGGGATTCTAAAAGCTGAAGAGTCTATTTCCATCAAAAGATCTTTTGAGGCTTTCTTCCTTAAGGCCTATGCTTTGGCTGATACTCTAGATACATTATGTTCTTCAACTATTATTTCACTTCTTGAACGTGCTTTGAAGTGTCCTTCAGATAATCTGCGCAAAGGTCAGGCCCTGAACAATCTTGGAAGTGTTTATGTTGACTGTGGGAAATTAGACTTAGCAGCTGATTGCTATATCAGTGCTCTTCAAATTCGGCATACCCGAGCCCACCAGGGTCTTGCTCGGGTTCATTTTCTCAGAAATGATAAGACTGCTGCATATGAGGAAATGACCAAACTTATCCAGAAGGCTAAAAACAATGCCTCTGCCTACGAGAAGAGGTCTGAGTACTGTGATCGTGAACTCACCAAGGCAGATCTGGAAATGGTGACTCGATTAGATCCACTTCGGGTGTTTCCTTATAGATATCGAGCTGCAGTGTTGATGGACAACCATAAAGAACCGGAAGCCATCGCTGAACTCTCTAGAGCAATTGCATTTAAAGCTGATCTGCACTTATTACATCTACGTGCAGCATTCCGTGAACACTCAGGGGATGTCTCAGGTGCCCTAAGGGACTGTCGAGCTGCACTCTCAATGGACCCACACCATCGAGGAATGTTGGAACTTCACAGCCGTGTAAATAGCCATCATGAACCATG 2663 0.4033 MRTFFTSESYKDADPNALNPQSCLQVERGKIPKLSSQYPSASIESLIKVQEPSILPFFKPIDYVEVLAQIHEELDSCPPQEQSNLYLLQFQVFRGLGEFKLMRRSLRTAWQRANSIHEKLIFGAWLKYEKQGEELIADLLTTCSRCAEEFGPIDITSYFPFAVNVSSQERVLMNENFISKNVIFTIGNEQIICDRQKISELSAPFHAMLKGYFSESHLETIDLSENDISPSGLRAIRDFSLTGSLHDVPPNILLEILVFANKYCCEGLKDACDRRLTSLVSSKEDAMELIEYALEENSPFLAVSCLQVLLRDLPNCLNDNQVVEMFISATRQKLAVMVGPVLFSLYCLLSEVSMNLNPTSDTTAHFLERLVDFAETDRQRLLAFHQLGCVRLLRKEYHEARRLFEVAVNAGHIYSVVGLARLDYINGEKLLSYEKLSSIISSSTPLGWMYQERSIYCEGDDRWDDLKKATDLDPTLIYPYMYRAASLMRSQDVQAALAEINRILRFKLSLECLELRFCFYLVLEDYKSALCDVQAILTLCPNYRMFEGRVAASQLCTLVREHVEHLTTADCWGKLYDCWSAVDDIGSLSVIYQMLDSDAAKGVLHFRQSLLLLRLNCPEAAIRSLQLARQHASSEHERLVYEGWILYDTGHYEEGILKAEESISIKRSFEAFFLKAYALADTLDTLCSSTIISLLERALKCPSDNLRKGQALNNLGSVYVDCGKLDLAADCYISALQIRHTRAHQGLARVHFLRNDKTAAYEEMTKLIQKAKNNASAYEKRSEYCDRELTKADLEMVTRLDPLRVFPYRYRAAVLMDNHKEPEAIAELSRAIAFKADLHLLHLRAAFREHSGDVSGALRDCRAALSMDPHHRGMLELHSRVNSHHEP 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02850 887 SUPERFAMILY TPR-like 693 876 IPR011990 GO:0005515
Bva04g02850 887 Pfam BTB/POZ domain 181 276 IPR000210 GO:0005515
Bva04g02850 887 ProSiteProfiles TPR repeat profile. 709 742 IPR019734 GO:0005515
Bva04g02850 887 Gene3D Tetratricopeptide repeat domain 360 547 IPR011990 GO:0005515
Bva04g02850 887 SUPERFAMILY TPR-like 474 738 IPR011990 GO:0005515
Bva04g02850 887 Gene3D Tetratricopeptide repeat domain 788 886 IPR011990 GO:0005515
Bva04g02850 887 SUPERFAMILY POZ domain 180 277 IPR011333 -
Bva04g02850 887 PANTHER ETO1-LIKE PROTEIN 1 1 885 - -
Bva04g02850 887 Coils Coil 754 781 - -
Bva04g02850 887 Gene3D Tetratricopeptide repeat domain 600 787 IPR011990 GO:0005515
Bva04g02850 887 Gene3D Potassium Channel Kv1.1; Chain A 171 320 IPR011333 -
Bva04g02850 887 SMART tpr_5 602 635 IPR019734 GO:0005515
Bva04g02850 887 SMART tpr_5 636 669 IPR019734 GO:0005515
Bva04g02850 887 SMART tpr_5 709 742 IPR019734 GO:0005515
Bva04g02850 887 SMART tpr_5 838 871 IPR019734 GO:0005515
Bva04g02850 887 PANTHER ETO1-RELATED 1 885 IPR044631 GO:0010105
Bva04g02850 887 SUPERFAMILY TPR-like 373 506 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02850 Bva-Chr4 24423818 24428691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02850 710 869 Glycosyltransferase AT3G04240 28.070 8.48e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02850 - - gmx:100793740 1401.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02850 04 24423818 24428691 Bva13g02787 13 20363719 20368563 BWGD