Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02775 ATGGCAGATGTACTCTCAGATGATCAAGTTGCAGGGTTCCGAGAAGCCTTTTGCCTCATTGACAAGGACTCCGACGGATACATTACTGTGGAGGAACTGGCAATTATGATTCAATCATTGGATGGACATCCAACGAAggaagaaatcaaagaaatgaTAAGTGAAGTGGATATCGATGGAAATGGGAGTATAGATTTTGACGAGTTCTTGAACATCATGGGCAGAAAAATGAAgGAAAGTTTAGCGGAGGAGCTTAGAGAAGTATTCAAGGTATTTGATAGAAATCAAGATGGATACATAACGGCCACTGAGCTGAGACAAGTAATGATGAACTTAGGGGAAAGACTAACAGACGAAGAGGCTGAACAAATGATTAGAGAGGCAGATTTGGACGGAGATGGTCAAGTTAGCTACGAAGAATTCCAAAAGATGATGATGCTTAATTG 446 0.3924 MADVLSDDQVAGFREAFCLIDKDSDGYITVEELAIMIQSLDGHPTKEEIKEMISEVDIDGNGSIDFDEFLNIMGRKMKESLAEELREVFKVFDRNQDGYITATELRQVMMNLGERLTDEEAEQMIREADLDGDGQVSYEEFQKMMMLN 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02775 148 ProSiteProfiles EF-hand calcium-binding domain profile. 44 79 IPR002048 GO:0005509
Bva13g02775 148 PANTHER CALCIUM BINDING PROTEIN 1 146 - -
Bva13g02775 148 ProSitePatterns EF-hand calcium-binding domain. 57 69 IPR018247 -
Bva13g02775 148 ProSiteProfiles EF-hand calcium-binding domain profile. 80 115 IPR002048 GO:0005509
Bva13g02775 148 ProSiteProfiles EF-hand calcium-binding domain profile. 8 43 IPR002048 GO:0005509
Bva13g02775 148 SMART efh_1 84 112 IPR002048 GO:0005509
Bva13g02775 148 SMART efh_1 120 148 IPR002048 GO:0005509
Bva13g02775 148 SMART efh_1 48 76 IPR002048 GO:0005509
Bva13g02775 148 SMART efh_1 12 40 IPR002048 GO:0005509
Bva13g02775 148 Coils Coil 102 122 - -
Bva13g02775 148 CDD EFh 84 146 IPR002048 GO:0005509
Bva13g02775 148 CDD EFh 13 73 IPR002048 GO:0005509
Bva13g02775 148 PANTHER CALMODULIN-LIKE PROTEIN 9 1 146 - -
Bva13g02775 148 ProSitePatterns EF-hand calcium-binding domain. 93 105 IPR018247 -
Bva13g02775 148 Gene3D - 76 148 - -
Bva13g02775 148 Pfam EF-hand domain pair 14 73 IPR002048 GO:0005509
Bva13g02775 148 Pfam EF-hand domain pair 83 145 IPR002048 GO:0005509
Bva13g02775 148 ProSiteProfiles EF-hand calcium-binding domain profile. 116 148 IPR002048 GO:0005509
Bva13g02775 148 ProSitePatterns EF-hand calcium-binding domain. 129 141 IPR018247 -
Bva13g02775 148 ProSitePatterns EF-hand calcium-binding domain. 21 33 IPR018247 -
Bva13g02775 148 Gene3D - 2 75 - -
Bva13g02775 148 SUPERFAMILY EF-hand 2 147 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02775 Bva-Chr13 20276383 20277225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02775 13 76 EF-hand Containing Proteins AT3G56800 42.188 1.36e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02775 K02183 K13448 gmx:100527005 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02844 04 24352258 24355389 Bva13g02775 13 20276383 20277225 BWGD