Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02738 atgttgagATTGGAAATATTTTCAGGCCAACAACtaaaaaagaagcagaagatAGAGATAGAAAAGGAGAGCAGACAAGCAGTTGAATTGGTTGTGATAACAGCAACCATTCTATTGGAGAAATTTTCTCAAGTATGCTTTAAATCTAATCATCGGAGTCTTAGAATAGATTTTagcaaattcttaaaattggACAGACTCCAAAGCAAACccgattttttctttttatctctgTCGCCGTCCTTACCAAACCTAGCTTCTGCAGAGCTACTGAATCCATTCCCTCTTCGCTCTTCGACGTTTCTTGAATCATCAAATACAGTTGGTATGGCTGGGGAAGATTGTGATGGACAGGACGTGGGCTATGTGCCCGAGAACCCTATTTTTCCTAAAAATGACTCTGATGAACATGATACTGGAGATGTGATTGATAACCCTGGGTTTCCTCAAGAAGAGTCTGATGAGCGTGATGTTGATAATGTGGTTGAGGAGTCCAATACTCCAGAAAATCATTTTGATGGAGATGGAGATGGTGATGTTGGAGATTTGCCCAAAACATCTGATTCTCCACAGGAGCTTATTGACAAACATCCTGATGTTGGGGATGTGCCCGAGGATTTTGGTTCTCCGCAGGTACAGGAATCTGACAATGAtacaaaaggaaatgaaataaaaaggtgGCCAGGGTGGCCTGGAGAGAACGTTTTCAGGATGTTGGTTCCTGTTCAAAAAGTTGGCAGTATTATTGGCCGCAAGGGcgaatttattaagaaaatcacTGAAGAGACTAAAGCTCGGATTAAAATTCTTGATGGTCCACCAGGAACCTCAGAAAGAGCAGTTGTCAGCAAATACTTTGGTAGCAAGAAGCTTTCACTGTACCTGGTAATGGTTTCTGCAAAAGAAGAGCCAGATCGATCTTTACCTCCTGCTGTAGATGGTTTGTTAAGGGTTCATAAACAGATTGTCAACATTGATCGTGATGCTGCAGATAGTACATCAGCTGCAGGCCGCTCTGTTGTTACAAGACTTCTGGTGGCAGATACCCAAGCAGGAAGCTTGATTGGGAAGCAGGGGTCTACTATTAAGACCATTCAGGACACTTCTGGTTGTACTATACGAGTTCTTGGATCAGAACACCTGCCAGTTTTTGCTCTGCGAGATGATAGTGTTGTAGAGATACAAGGGGAACCTTCTGGAGTTCACAAGGCAGTGGAGCTTATTGCAACTCATCTACGGAAGTTCTTGGTTGACCGCAGTATAGTTGGAGTGTTTGAATCGCAGATGCAAATGCCAGATGTTCTTGTTAACCAAAATGTGCCACCGCACCAAACTTGGGGTCCTCCTCCTCAAGGCTTTGGAGCTCCTACTGGTGGTGGGCCCGCCTTTGCATCTAGTCATCAATATATGCCACCGCCTTCACATCACTATGATAATTACTATCCATCTGCTGACCTACCTCCGATAGACAAGCACCATCATCAAGGTCCACTGCCTGCCTATGGAAGAGATACTTCTATGGGTATTCATCCAGGCACTGCACAACCGCAACAATCTGTTGTGACTAAGGTCACTCAGCATATGCAAATTCCTCTATCATATGCGGATGCTGTTATTGGGACATCAGGTGCAAATATCAGCTATATACGCCGGGCCAGTGGAGCAAATATTACAATTCAGGAAACAAGGGGTGCCCCTGGGGAGATGACTGTTGAGATAAGTGGGACTGCTTCACAAATACAAACAGCCCAACAGCTCGTTCAGAATTTCATGGTTGAAGCTGCCAATTCGGCACCGGACCCCATGGGGGGATCAATCAGCCAGGGTTATAATTCTTATCCTATCAATGCTCCCGTTTATGCGTCTCCACCCTCGAATGCTGGAGGTCATGCAGCCCATGCACCTACTGATTATGGCTCCGTATATGGCACCAATTACGGTTATTA 1946 0.427 MLRLEIFSGQQLKKKQKIEIEKESRQAVELVVITATILLEKFSQVCFKSNHRSLRIDFSKFLKLDRLQSKPDFFFLSLSPSLPNLASAELLNPFPLRSSTFLESSNTVGMAGEDCDGQDVGYVPENPIFPKNDSDEHDTGDVIDNPGFPQEESDERDVDNVVEESNTPENHFDGDGDGDVGDLPKTSDSPQELIDKHPDVGDVPEDFGSPQVQESDNDTKGNEIKRWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGTSERAVMVSAKEEPDRSLPPAVDGLLRVHKQIVNIDRDAADSTSAAGRSVVTRLLVADTQAGSLIGKQGSTIKTIQDTSGCTIRVLGSEHLPVFALRDDSVVEIQGEPSGVHKAVELIATHLRKFLVDRSIVGVFESQMQMPDVLVNQNVPPHQTWGPPPQGFGAPTGGGPAFASSHQYMPPPSHHYDNYYPSADLPPIDKHHHQGPLPAYGRDTSMGIHPGTAQPQQSVVTKVTQHMQIPLSYADAVIGTSGANISYIRRASGANITIQETRGAPGEMTVEISGTASQIQTAQQLVQNFMVEAANSAPDPMGGSISQGYNSYPINAPVYASPPSNAGGHAAHAPTDYGSVYGTNYGY 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02738 633 ProSiteProfiles Type-1 KH domain profile. 324 393 - -
Bva13g02738 633 SMART kh_6 507 577 IPR004087 GO:0003676
Bva13g02738 633 SMART kh_6 323 398 IPR004087 GO:0003676
Bva13g02738 633 SMART kh_6 232 312 IPR004087 GO:0003676
Bva13g02738 633 ProSiteProfiles Type-1 KH domain profile. 508 572 - -
Bva13g02738 633 ProSiteProfiles Type-1 KH domain profile. 233 300 - -
Bva13g02738 633 CDD PCBP_like_KH 326 394 - -
Bva13g02738 633 CDD KH-I 510 573 - -
Bva13g02738 633 CDD PCBP_like_KH 235 304 - -
Bva13g02738 633 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 225 287 IPR036612 GO:0003723
Bva13g02738 633 MobiDBLite consensus disorder prediction 114 226 - -
Bva13g02738 633 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 321 407 IPR036612 GO:0003723
Bva13g02738 633 Gene3D K Homology domain, type 1 497 583 IPR036612 GO:0003723
Bva13g02738 633 MobiDBLite consensus disorder prediction 149 182 - -
Bva13g02738 633 PANTHER POLY(RC)-BINDING-LIKE PROTEIN 170 625 - -
Bva13g02738 633 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 170 625 - -
Bva13g02738 633 Pfam KH domain 236 288 IPR004088 GO:0003723
Bva13g02738 633 Pfam KH domain 327 394 IPR004088 GO:0003723
Bva13g02738 633 Pfam KH domain 510 573 IPR004088 GO:0003723
Bva13g02738 633 Gene3D - 233 403 - -
Bva13g02738 633 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 500 578 IPR036612 GO:0003723
Bva13g02738 633 MobiDBLite consensus disorder prediction 189 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02738 Bva-Chr13 20086973 20094315 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02738 K21444 - gmx:100799901 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02816 04 24198359 24201391 Bva13g02738 13 20086973 20094315 BWGD