Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02433 ATGGTGGGAAGCATTATGGGGATTGTCCGAAATGCATACTCAAATGGATCTGTTCAGAATTTTAATGGGTTGGAAGAGAAGCTTGATGATCTGAGGGGGCTTCTTGGCAAAGCTGATGGAGATCCTCTAAGAATTGTGAGTATTGGAGCTGGTGCCTGGGGCAGTGTTTTTGCAGCTCTACTGCAAGATAGTTATGGACAATTCAGGGACAAGGTGCAAATCAGGATATGGAGAAGGCCAGGTAGGGCAGTTGATCGAGCCACTGCAGAGCATCTCTTTGAAGTTATCAATTCCAGGGAGGATGTGCTGAGAAGGTTGATCTGGCGTTGTGCTTATTTAAAGTATGTTGAGGCAAGGCTCGGAGACAGGACTCTTTATGCTGATGAGATTTTGAAAGATGGGTTTTGCTTGAACATGATTGATACACCACTTTGTCCATTGAAGGTGGTCACAAACTTGCAGGAAGCCGTTTGGGATGCTGATATTGTTGTTAATGGGTTGCCTTCAACTGAAACACGTGAAATTTTCGAggatataaacaaatattggAAGGAGAGGATCACAGTGCCTATCATAATCTCTCTAGCAAAGGGTATAGAGGCTGCATTGGAGCCTGTTCCCCATATTATAACTCCTACAAAGATGATTCACCAAGCAACTGGAGTGCCTATGGAGAACATACTTTATCTCGGTGGTCCAAATATCGCCTCAGAAATTTACAATAAGGAATATGCCAATGCTCGAATCTGTGGAGCTGAAAAATGGAGGAAACCTCTGGCAAAATTTCTAAGGCAGCCACATTTTATAGTCTGGGACAACAGTGACCTCATCACACATGAAGTCATGGGTGGCTTGAAAAATGTCTATGCAATCGGAGCTGGAATGGTAGCTGCCCTTACAAATGAGAGTGCTACCAGCAAATCTGTTTACTTTGCACACTGTACATCAGAAATGATATTCATTACTCACTTGTTGACCGAAGAACCTGAGAAACTGGCTGGGCCATTGCTGGCCGACACTTACGTTACCTTGTTAAAAGGACGCAATGCATGGTATGGCCAAATGTTAGCCAAGGGTCAACTAAGCCCAGACATGGGTGACAGCATTAGTGGCAAAGGAATGATTCAGGGTGTCTCTGCAGTGGAAGCATTCTTTGAACTTCTGAGCCAAACAAGCCTGAGCGTGTTGCATCCTGAGGATAACAAGCCGGTTGCTCCGGTGGAGCTGTGTCCTATCTTGAAGACACTATATAAAATACTGATATCAAGGGAATTGACAACACAAGATATTCTGCAAGCTCTGAGGGATGAGAATCTGAATGATCCCCGTGAACGCATTGCCATTGCACAAAGCCATGCTTTTTACCGCCCTTCACTTCTTGGAAAACCTTG 1391 0.44 MVGSIMGIVRNAYSNGSVQNFNGLEEKLDDLRGLLGKADGDPLRIVSIGAGAWGSVFAALLQDSYGQFRDKVQIRIWRRPGRAVDRATAEHLFEVINSREDVLRRLIWRCAYLKYVEARLGDRTLYADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEDINKYWKERITVPIIISLAKGIEAALEPVPHIITPTKMIHQATGVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLITHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLTEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLSPDMGDSISGKGMIQGVSAVEAFFELLSQTSLSVLHPEDNKPVAPVELCPILKTLYKILISRELTTQDILQALRDENLNDPRERIAIAQSHAFYRPSLLGKP 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02433 463 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 147 249 IPR011128 GO:0016616|GO:0046168|GO:0051287
Bva13g02433 463 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 275 423 IPR006109 GO:0004367|GO:0005975
Bva13g02433 463 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 1 463 - -
Bva13g02433 463 Gene3D - 138 271 - -
Bva13g02433 463 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 275 423 IPR008927 -
Bva13g02433 463 Gene3D - 26 106 - -
Bva13g02433 463 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 1 463 - -
Bva13g02433 463 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 268 292 IPR006168 GO:0004367|GO:0006072|GO:0009331
Bva13g02433 463 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 47 64 IPR006168 GO:0004367|GO:0006072|GO:0009331
Bva13g02433 463 Gene3D - 275 436 IPR013328 GO:0016491
Bva13g02433 463 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 275 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02433 Bva-Chr13 18392081 18395684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02433 1 463 Acyl Lipid Metabolism Gene Families AT2G41540 86.422 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02433 K00006 - gmx:100797552 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02157 04 20870043 20874094 Bva13g02433 13 18392081 18395684 BWGD
Bva13g02433 13 18392081 18395684 Bva13g02433 13 18392081 18395684 ECH