Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02157 ATGGGAATTGTCCGAAATACATACTCAAATGGATCTGTTCAGAATTTTAATGTGATGGAAGAGAAGCTTGATGAGTTGAGAGGGCATCTGGGCAAGGCTGATGGTGATCCTATAAGAATTGTGAGTGTTGGAGCTGGTGCATGGGGCAGTGTTTTTGCAGCTCTACTGCAAGATAGCTATGGGCAATTCAGGGATAAGGTGCAAATCAGAATATGGAGAAGGCCAGGAAGGAGAGTTGATCGAGCCACCGCAGAGCATCTCTTTGAAGTCATCAATTCAAGGGAAGATGTCTTGAGAAGGTTGATCCGGCGTTGTGCTTATTTGAAGTATGTTGAGGCAAGGCTCGGAGATAGGACTCTTTTTGCTGATGAGATTTTGAAAGATGGGTTTTGCTTGAACATGATTGATACACCACTTTGTCCGTTGAAAGTGGTCACCAACTTGCAGGAAGCAGTTTGGGATGCTGATATTGTGATTAATGGTTTGCCTTCAACTGAAACACGTGAAATTTTCGAGGAGATAAGTAAATATTGGAAGGAGAGGATCACAGTGCCTATCATTATCTCTCTAGCAAAGGGTATAGAGGCTGCGTTGGAGCCTGTTCCCCATATTATAACTCCTACAAAAATGATTAACCAAGCAACTGGAGTGCCTATGGAGAACATACTATATCTCGGTGGTCCAAACATTGCCTCGGAAATTTACAACAAGGAGTATGCCAATGCTCGAATATGTGGAGCTGAAAAATGGAGGAAACCTCTGGCAAACTTTCTAAGGCAACCACATTTTATAGTCTGGGACAACAGTGACCTCGTAACACACGAAGTCATGGGTGGCTTGAAAAATGTCTACGCAATCGGAGCTGGAATGGTAGCAGCCCTTACCAACGAGAGTGCTACCAGCAAATCTGTCTACTTTGCACATTGTACATCAGAAATGATATTCATCACTCACTTGTTGGCTGAAGAACCTGAGAAACTTGCCGGGCCATTGCTGGCTGACACTTATGTTACCTTGTTGAAAGGGCGCAATGCGTGGTACGGCCAAATGTTAGCTAAGGGTCAATTAAGCCCAGACATGGGTGATAGCATCAGTGGCAAAGGAATGATTCAgGGTGTTTCTGCAGTGGAAGCGTTCTTTGAACTTTTGAGGCAGACAAGCCTAAGCGTGTTACATCCTGAAGAAAACAAGCCGGTTGCTCCTGTGGAGCTATGTCCTATCTTGAAGACattatacaaaatattgaTATCCAGgGAATTATCAACACAAGCTATTCTGCAAGCTCTGAGGGATGAGAATCTGAATGATCCCCGAGAACGCATTGCCATTGCACAAAGTCATGATTTTTACCGTCCTTCACTTCTTGGAAAACCTTA 1376 0.4353 MGIVRNTYSNGSVQNFNVMEEKLDELRGHLGKADGDPIRIVSVGAGAWGSVFAALLQDSYGQFRDKVQIRIWRRPGRRVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETREIFEEISKYWKERITVPIIISLAKGIEAALEPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLANFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLSPDMGDSISGKGMIQGVSAVEAFFELLRQTSLSVLHPEENKPVAPVELCPILKTLYKILISRELSTQAILQALRDENLNDPRERIAIAQSHDFYRPSLLGKP 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02157 458 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 5 457 - -
Bva04g02157 458 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 5 457 - -
Bva04g02157 458 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 270 419 IPR006109 GO:0004367|GO:0005975
Bva04g02157 458 Gene3D - 132 266 - -
Bva04g02157 458 Gene3D - 21 101 - -
Bva04g02157 458 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 142 244 IPR011128 GO:0016616|GO:0046168|GO:0051287
Bva04g02157 458 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 270 418 IPR008927 -
Bva04g02157 458 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 263 287 IPR006168 GO:0004367|GO:0006072|GO:0009331
Bva04g02157 458 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 42 59 IPR006168 GO:0004367|GO:0006072|GO:0009331
Bva04g02157 458 Gene3D - 270 430 IPR013328 GO:0016491
Bva04g02157 458 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 270 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02157 Bva-Chr4 20870043 20874094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02157 5 458 Acyl Lipid Metabolism Gene Families AT2G41540 87.033 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02157 K00006 - gmx:100794592 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02157 04 20870043 20874094 Bva13g02433 13 18392081 18395684 BWGD
Bva04g02157 04 20870043 20874094 Bva04g02157 04 20870043 20874094 ECH