Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02410 ATGTCTAGCTCTGCAAAAACTTTGGATCCTGCATTCCAGGGAGTGGGTCAAAGAGTAGGGACTGAGATTTGGAGGATTGAGAATTTTCAGCCAGTTCCATTGTCCAAATCTGACTACGGAAAGTTCTATATGGGAGATTCTTACATTATCTTGCAGACAACACAAGGAAAAGGGGGCACTTATTTTTATGACATACACTTCTGGATTGGAAAGGATACAAGTCAGGATGAAGCTGGAACAGCAGCCATCAAAGCTGTTGAACTTGATGCAGCTCTTGGAGGACGTGCAGTGCAGCACAGGGAAGTCCAAGGGCATGAATCTGACAAGTTCTTGTCATATTTTAAACCATGTATTATACCATTAGAGGGTGGTGTTGCGTCTGGATTTAGAAAACCTGAAGAACAAGAGTTTGAAAAACGCTTGTATGTATGCAGAGGAAAACGAGTTGTCAGAATGAAACAGGTCCCTTTTGCACGGTCTTCACTGAATCATGATGATGTATTTATCCTAGACACAGAGAAGAAGATTTATCAATTCAATGGTGCAAATTCCAATATTCAGGAAAGAGCCAAGGCTTTGGAAGTAATTCAGTTTCTTAAGGAAAAGTATCATGAAGGGAAATGTGACGTAGCAATTGTTGATGATGGCAAGTTAGACACAGAGTCAGACTCCGGTGAATTTTGGGTTCTCCTAGGTGGTTTTGCTCCCATTGGAAAGAAGGTTATCAGCGAGGATGATATCATTCCTGAGGCCACTCTTGCTCAACTTTATAgTATTGTGAATGGTGAGGTCAAGTCTGTGGAAGGGGAGCTGTCTAAATCATTGctggaaaataataaatgctaTTTATTGGACTGTGGTGCTGAGTTATTTGTCTGGGTTGGCCGGTTGACAcaagttgaagaaagaaaagcagcTTGCCAGGCAGCTGAGGAATTTGTTGCAAGCCAAAATAGGCCAAAATCAACACGGATAACTAGGATTATTCAAGGTTATGAGACACATTCATTTAAGTCCAACTTTGATTCTTGGCCATCAGGATCTGCTACTCCAGGTGCTGAGGAAGGAAGAGGAAAAGTTGCAGCTTTGCTGAAGCAACAAGGTCTTGGTGTCAAGGGAAGTACAAAAAGTGCAACAGTAAATGAGGAAATTCCATCTTTGCTGGAAGGAGGTGGAAAGATGGAGgTATGGCGGATCAATGGAAGTGCCAAGACACCATTACCTCAGGAAGAGATTGGTAAATTTTATAGTGGTGATTGCTACATAGTTTTGTACACTTACCACTCGGGTGAGAGAAAGGAAGACTATTTTTTGTGCTGCTGGTTTGGGAAAGACAGCATTGAGGATGACCAAAAGATGGCTACTCGGTTGACCAATACAATATTCAACTCGCTAAAGGGCAGACCTGTTCAGGGTCGGATATTTGAAGGTAAAGAGCCGCCACAGTTTGTTGCTCTTTTTCAGCCCATGGTGGTCCTTAAGGGAGGTTTGAGCTCTGGTTACAAGAAGTTTATATCAGAAAAAGGTTTGGCAGATGAGACATACACGGCAGAGTCTATTGCACTTATTCGAATATCTGGAACTTCTGCTCATAACAATAAAGCAGTGCAAGTTGATGCAGTGGCAACATCATTAAATTCCACCGAGTGTTTCATTCTACAATCTGGTTCATCGATTTTCACATGGCATGGGAACCAATGTTCTTTTGAGCAGCAGCAGCTAGCAGCAAAAGTTGCTGAGTTTTTGAAGCCAGGAGTTACTTTAAAACATGCCAAAGAAGGAACAGAAAGCTCATCTTTCTGGTTTCCACTTGGAGGAAAACAAAGTTACATTAgcaaaaaaatcacaaatgaCGTCACCACAGATCCACATTTGTTCACCTTCTCATTTAATAAAGGAAAGTTTAAGGTAGAGGAAGTTTACAACTTCTCTCAAGATGATCTGTTGACAGAGGATATCCTCATACTCGACACACATGCAGAAGTGTTTGTCTGGGTTGGTCAGTCTGTGGactcaaaagaaaagcaaaatgcTTATGAAATTGGTCAGAATTACATAGATATGGCTGCCTCTCTGGAAGGACTGTCTCCTCATGTGCCATTGTATAAAGTCACAGAAGGAAACGAGCCCTGCTTCTTCACAACATACTTTTTATGGGATCATACAAAAGCTACTGTTCAAGGAAACTCGTTCCAGAAAAAGGTTATACTACTCTTTGGGATTGGCCATGCAGTGGAGGAAAAATCCAATGGGTCAAGTGAAGGAGGACCAAGACAAAGGGCAGAAGCTTTGGCAGCCTTGTCTTCTGCATTTAATTCATCTTCTGAGAAGACTTCCAGTATGTCACAGGATAGGTTGAATGGATCAAACCAAGGAGGACCAAGACAAAGAGCAGAAGCTTTAGCTGCATTGAACTCGGCATTTAATTCATCTGGAATTAGAAGTTCTGCTCCCAGGCCTTCTGGAACAAGTCAAGGGTCACAAAGAGCAGCAGCAGTAGCTGCTCTTTCACAAGTTCTCCATGCTGAAAAGAACAAGCAACCGCATGATGATTCTGCTGGTGGGGTTGTCAATAGTCCTCTCTCAGAAACAACAGCTAAAAGTGAAAGTACTCATTCTGAAACGGAAGTTGCTGAAGAAGCTGGAGAATCCAAAATGAGTCAGGAACTTCCCCCCATAAGTGGAAGCAACGGGGCTTCAAcgccaaaacaagaaaatgtggaAGATGGGAATGGTCAGAGTAGTCAGGGAACATTCAGTTATGATCAATTAAAGACTAAATCTGATAATCCTGTCACtggaattgattttaaaaggaGAGAGgCCTATCTGTCTGATGAAGATTTCCGAAGTATATTTGGAGTATCAAAGGAAGCGTTCTACAAAATGCCAAAATGGAAGCAAGACatgcagaaaaggaaatttgatTTGTTCTA 2936 0.4012 MSSSAKTLDPAFQGVGQRVGTEIWRIENFQPVPLSKSDYGKFYMGDSYIILQTTQGKGGTYFYDIHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREVQGHESDKFLSYFKPCIIPLEGGVASGFRKPEEQEFEKRLYVCRGKRVVRMKQVPFARSSLNHDDVFILDTEKKIYQFNGANSNIQERAKALEVIQFLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLLGGFAPIGKKVISEDDIIPEATLAQLYSIVNGEVKSVEGELSKSLLENNKCYLLDCGAELFVWVGRLTQVEERKAACQAAEEFVASQNRPKSTRITRIIQGYETHSFKSNFDSWPSGSATPGAEEGRGKVAALLKQQGLGVKGSTKSATVNEEIPSLLEGGGKMEVWRINGSAKTPLPQEEIGKFYSGDCYIVLYTYHSGERKEDYFLCCWFGKDSIEDDQKMATRLTNTIFNSLKGRPVQGRIFEGKEPPQFVALFQPMVVLKGGLSSGYKKFISEKGLADETYTAESIALIRISGTSAHNNKAVQVDAVATSLNSTECFILQSGSSIFTWHGNQCSFEQQQLAAKVAEFLKPGVTLKHAKEGTESSSFWFPLGGKQSYISKKITNDVTTDPHLFTFSFNKGKFKVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQNAYEIGQNYIDMAASLEGLSPHVPLYKVTEGNEPCFFTTYFLWDHTKATVQGNSFQKKVILLFGIGHAVEEKSNGSSEGGPRQRAEALAALSSAFNSSSEKTSSMSQDRLNGSNQGGPRQRAEALAALNSAFNSSGIRSSAPRPSGTSQGSQRAAAVAALSQVLHAEKNKQPHDDSAGGVVNSPLSETTAKSESTHSETEVAEEAGESKMSQELPPISGSNGASTPKQENVEDGNGQSSQGTFSYDQLKTKSDNPVTGIDFKRREAYLSDEDFRSIFGVSKEAFYKMPKWKQDMQKRKFDLF 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02410 978 Gene3D Severin 249 354 IPR029006 -
Bva13g02410 978 CDD gelsolin_S6_like 622 719 - -
Bva13g02410 978 SMART VILL_6 139 234 IPR007122 GO:0051015
Bva13g02410 978 SMART VILL_6 252 344 IPR007122 GO:0051015
Bva13g02410 978 SMART VILL_6 624 720 IPR007122 GO:0051015
Bva13g02410 978 SMART VILL_6 19 117 IPR007122 GO:0051015
Bva13g02410 978 SMART VILL_6 392 490 IPR007122 GO:0051015
Bva13g02410 978 SMART VILL_6 518 607 IPR007122 GO:0051015
Bva13g02410 978 MobiDBLite consensus disorder prediction 810 832 - -
Bva13g02410 978 Gene3D Villin headpiece domain 917 978 IPR036886 GO:0003779|GO:0007010
Bva13g02410 978 MobiDBLite consensus disorder prediction 772 796 - -
Bva13g02410 978 MobiDBLite consensus disorder prediction 810 833 - -
Bva13g02410 978 CDD gelsolin_S3_like 251 343 - -
Bva13g02410 978 CDD gelsolin_S4_like 387 487 - -
Bva13g02410 978 SUPERFAMILY Actin depolymerizing proteins 596 717 - -
Bva13g02410 978 Gene3D Severin 133 247 IPR029006 -
Bva13g02410 978 MobiDBLite consensus disorder prediction 772 794 - -
Bva13g02410 978 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Bva13g02410 978 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Bva13g02410 978 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Bva13g02410 978 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Bva13g02410 978 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Bva13g02410 978 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Bva13g02410 978 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Bva13g02410 978 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Bva13g02410 978 PANTHER VILLIN-3-LIKE ISOFORM X1 1 978 - -
Bva13g02410 978 ProSiteProfiles Headpiece (HP) domain profile. 913 978 IPR003128 GO:0003779|GO:0007010
Bva13g02410 978 SUPERFAMILY VHP, Villin headpiece domain 915 978 IPR036886 GO:0003779|GO:0007010
Bva13g02410 978 MobiDBLite consensus disorder prediction 869 883 - -
Bva13g02410 978 MobiDBLite consensus disorder prediction 889 930 - -
Bva13g02410 978 SUPERFAMILY Actin depolymerizing proteins 512 614 - -
Bva13g02410 978 SUPERFAMILY Actin depolymerizing proteins 383 529 - -
Bva13g02410 978 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Bva13g02410 978 CDD gelsolin_S5_like 519 609 - -
Bva13g02410 978 Gene3D Severin 6 132 IPR029006 -
Bva13g02410 978 SUPERFAMILY Actin depolymerizing proteins 134 238 - -
Bva13g02410 978 SMART VHP_1 943 978 IPR003128 GO:0003779|GO:0007010
Bva13g02410 978 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Bva13g02410 978 Gene3D Severin 614 735 IPR029006 -
Bva13g02410 978 MobiDBLite consensus disorder prediction 845 932 - -
Bva13g02410 978 CDD gelsolin_S1_like 12 124 - -
Bva13g02410 978 CDD gelsolin_S2_like 138 232 - -
Bva13g02410 978 PANTHER VILLIN 1 978 IPR007122 GO:0051015
Bva13g02410 978 Pfam Gelsolin repeat 29 111 IPR007123 -
Bva13g02410 978 Pfam Gelsolin repeat 635 713 IPR007123 -
Bva13g02410 978 Pfam Gelsolin repeat 532 583 IPR007123 -
Bva13g02410 978 Pfam Gelsolin repeat 149 217 IPR007123 -
Bva13g02410 978 Pfam Gelsolin repeat 267 337 IPR007123 -
Bva13g02410 978 Pfam Gelsolin repeat 408 483 IPR007123 -
Bva13g02410 978 Gene3D Severin 388 518 IPR029006 -
Bva13g02410 978 Pfam Villin headpiece domain 943 978 IPR003128 GO:0003779|GO:0007010
Bva13g02410 978 Gene3D Severin 519 612 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02410 Bva-Chr13 18221985 18234824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02410 - - gmx:100788765 1604.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02175 04 20963873 20976399 Bva13g02410 13 18221985 18234824 BWGD