Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02175 ATGTCTAGCTCTGTGAAAGCTCTGGATCCTGCATTTCAGGGAGTGGGTCAAAGAGTAGGGACTGAGATATGGAGGATTGAGAATTTTCAGCCGGCTCCATTGCCCAAATCAGACCATGGAAAGTTCTACATGGGAGATTCTTACATCATTTTGCAGACAACGCAAAGCAAAGGGGgctcttatttttatgatatacaCTTCTGGCTTGGAAGGGATACAAGTCAGGACGAAGCAGGAACAGCAGCTATTAAAACTGTTGAACTTGATGTATCCCTTGGAGGGCGTGCAGTGCAGCATAGGGAAGTCCAAGGGCATGAATCTGACAAGTTCTTGTCATACTTTAAACCATGTATTATACCATTAGAGGGTGGTGTTGCATCTGGATTTAGAAAAcctgaagaagaagagtttgAAACGCGTTTATATGTATGCAGAGGAAAACGAGTTGTCAGAATGAAACAGATCCCTTTTGCACGGTCTTCGTTGAATCATGATGATGTATTTATCCTAGACACAGAGAATAAGATTTATCAATTCAATGGTGCAAATTCCAATATTCAGGAAAGAGCGAAGGCTTTAGAAATAGTTCAATTTCTGAAGGAAAAGTATCATGGAGGGACATGTGACGTAGCGATTGTTGATGATGGCAAGTTGGATACAGAGTCAGACTCTGGTGAATTTTGGGTTCTCTTAGGTGGTTTTGCACCCATTGGAAAGAAGGTCATCACTGACGATGATATCATTCCAGAGGCCACTCCTGCTCAACTTTATAgTATTGTGGACGGTGAGGTCAAGTCTGTGGAAGGTGAACTGTCTAAATCGTTGCTGGAGAATAACAAATGCTATTTACTGGACTGTGGTGCTGAGGTATTTGTCTGGGTTGGCCGGGTGACAcaagttgaagaaagaaaagcaacaaGCCAGGCAGCTGAGGAGTTTATTGCGAGCCAAAATAGGccaaaatcaacaagaatAACTAGGGTCATTCAAGGTTACGAGACACATTCATTTAAGTCCAATTTTGATTCTTGGCCGTCAGGATCTGCAACTCCAGGTGCAGAGGAAGGAAGAGGAAAAGTTGCAGCTTTGCTAAAGCAACAAGGTCTTGGTGTCAAGGGAAGTACAAAAAGTCCAATAGTAAATGAGGAAATTCCACCTTTGCTGGAAGGAAGTGGAAAGATGGAGGTATGGCGGATCAATGGAAGTGCCAAGACTCCATTACCCCAGGAAGAGATTGGTAAATTTTATAGTGGTGATTGCTACATAGTTTTGTACACGTACCACTCAGGCGAGAGGAAGGAAGACTACTTTTTGTGCAGTTGGTTTGGGAAAGACAGCATTGAGGAGGACCAAAAGATGGCTACTCGGTTGGCCAATACAATGTTCAACTCGCTAAAGGGTAGACCTGTTCAGGGTCGGATATTTGAAGGTAAAGAACCACCACAGTTTGTTGCTCTTTTTCAGCCCATGGTGGTCTTCAagGGAGGTTTGAGCTCTGGTTACAAAACgtttatagaagaaaaaggtttGGCAGATGAGACATACACAGCAGAGTCTGTTGCACTTATTCGAATATCTGGAACTTCTGTTCATAACAATAAAGCAGTGCAAGTTGATGCAGTGGCAACATCATTAAATTCCACTGAGTGTTTCATCCTACAATCTGGCTCAACAATTTTCTTGTGGCAAGGAAACCAATGTTCCTTTGAGCAGCAGCAGTTAGCAGCAAAAGTTGCTGGTTTTTTGAAGCCAGGAGTTACTCTAAAACATGCTAAAGAAGGAACAGAGAGCTCATCATTCTGGTTCGCACTTGGAGGGGGGAAACAAAGTTATATTAGCAAAAAATCCACCAATGACACCACCAGAGATCCACATTTGTTCACTTACTCAATTAATAAAGGTAGCATCTCCTTATGCGATAGCATAACTGGAAAGTTTAAGGTAGAGGAGGTTTACAACTTCTCTCAAGATGATCTGTTGACAGAGGATATCCTCATACTTGACACCCACGCAGAAGTGTTTGTCTGGGTTGGTCAGTCTGTGGactcaaaagaaaagcaaaatgcCTTTGAAATTGGCCAGAATTACATAGATATGGCTGCCTCTCTGGAAGGACTGTCTCCACATGTACCATTGTATAAAGTCACGGAAGGGAATGAGCCTTGCTTCTTCACAACATACTTTTCATGGGATCATACAAAAGCTACTGTTCAAGGAAACTCATTCCAGAAAAAGGTGATACTGCTCTTTGGGCTTGGGCATGCTGAGGAAAAGTTCAATGGGTCGAGTGAAGGAGGACCAAGACAAAGAGCAGATGCTTTGGCGGCTTTGACTTCTGCATTTAATTCATCGTCTGAGAAGACTTCCAGTGTGTTACAGGAGAGGTTGAATGGTAACCAAGAAGGACCAAGACAAAGAGCAGAAGCTTTAGCTGCATTGAACTCGGCCTTTAATTCATCTCCTGGAAGTAGAGGTTCTGCTTCTAGGCCTTCTGGATCCAGTCAAGGGTCACAAAGAGCAGCAGCAGTAGCTGCTCTTTCGCAAGTTCTTACTGCTGAAAAGAACAAGCAATCACCGGATGCTTCTCCTCATGCAGTGGGCGGTAGTCCTCCCTCAGAAAGTAGCCCTAATGCAGCTAAAAGTGAAAGTGCTTATTCTGAAATGGAAGCTCCTGAAGAAGCTGCAGAATTAAAGGAGATACAAGAACTTTCCCCCAAAAGTGGAAGCAATGGGGATTCAACACCAAAACTTTCTATGGAGGATGGGAATGGTCAGATTATCACATTCAATTATGATCAATTGAAGACTAAATCTAATAATCCAGTCACTGACATTGATTTTAAACGTAGAGAGGCCTATCTGTGTGAGGAAGATTTCCTAAGTATATTTGGAGTAGACAAAGAAACATTCTACAAAATGCCAAGATGGAAGCAAGAcatacagaaaaagaaatttgatttgttcTA 2966 0.408 MSSSVKALDPAFQGVGQRVGTEIWRIENFQPAPLPKSDHGKFYMGDSYIILQTTQSKGGSYFYDIHFWLGRDTSQDEAGTAAIKTVELDVSLGGRAVQHREVQGHESDKFLSYFKPCIIPLEGGVASGFRKPEEEEFETRLYVCRGKRVVRMKQIPFARSSLNHDDVFILDTENKIYQFNGANSNIQERAKALEIVQFLKEKYHGGTCDVAIVDDGKLDTESDSGEFWVLLGGFAPIGKKVITDDDIIPEATPAQLYSIVDGEVKSVEGELSKSLLENNKCYLLDCGAEVFVWVGRVTQVEERKATSQAAEEFIASQNRPKSTRITRVIQGYETHSFKSNFDSWPSGSATPGAEEGRGKVAALLKQQGLGVKGSTKSPIVNEEIPPLLEGSGKMEVWRINGSAKTPLPQEEIGKFYSGDCYIVLYTYHSGERKEDYFLCSWFGKDSIEEDQKMATRLANTMFNSLKGRPVQGRIFEGKEPPQFVALFQPMVVFKGGLSSGYKTFIEEKGLADETYTAESVALIRISGTSVHNNKAVQVDAVATSLNSTECFILQSGSTIFLWQGNQCSFEQQQLAAKVAGFLKPGVTLKHAKEGTESSSFWFALGGGKQSYISKKSTNDTTRDPHLFTYSINKGSISLCDSITGKFKVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQNAFEIGQNYIDMAASLEGLSPHVPLYKVTEGNEPCFFTTYFSWDHTKATVQGNSFQKKVILLFGLGHAEEKFNGSSEGGPRQRADALAALTSAFNSSSEKTSSVLQERLNGNQEGPRQRAEALAALNSAFNSSPGSRGSASRPSGSSQGSQRAAAVAALSQVLTAEKNKQSPDASPHAVGGSPPSESSPNAKSESAYSEMEAPEEAAELKEIQELSPKSGSNGDSTPKLSMEDGNGQIITFNYDQLKTKSNNPVTDIDFKRREAYLCEEDFLSIFGVDKETFYKMPRWKQDIQKKKFDLF 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02175 987 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Bva04g02175 987 PRINTS Gelsolin family signature 685 704 IPR007122 GO:0051015
Bva04g02175 987 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Bva04g02175 987 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Bva04g02175 987 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Bva04g02175 987 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Bva04g02175 987 PRINTS Gelsolin family signature 656 678 IPR007122 GO:0051015
Bva04g02175 987 SMART VILL_6 19 117 IPR007122 GO:0051015
Bva04g02175 987 SMART VILL_6 634 730 IPR007122 GO:0051015
Bva04g02175 987 SMART VILL_6 251 344 IPR007122 GO:0051015
Bva04g02175 987 SMART VILL_6 392 490 IPR007122 GO:0051015
Bva04g02175 987 SMART VILL_6 139 234 IPR007122 GO:0051015
Bva04g02175 987 SMART VILL_6 518 607 IPR007122 GO:0051015
Bva04g02175 987 SUPERFAMILY Actin depolymerizing proteins 134 240 - -
Bva04g02175 987 MobiDBLite consensus disorder prediction 868 882 - -
Bva04g02175 987 MobiDBLite consensus disorder prediction 785 800 - -
Bva04g02175 987 PANTHER VILLIN 1 987 IPR007122 GO:0051015
Bva04g02175 987 Gene3D Severin 6 132 IPR029006 -
Bva04g02175 987 MobiDBLite consensus disorder prediction 785 921 - -
Bva04g02175 987 CDD gelsolin_S6_like 623 731 - -
Bva04g02175 987 CDD gelsolin_S4_like 386 487 - -
Bva04g02175 987 MobiDBLite consensus disorder prediction 902 921 - -
Bva04g02175 987 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Bva04g02175 987 Gene3D Severin 133 246 IPR029006 -
Bva04g02175 987 Gene3D Severin 388 518 IPR029006 -
Bva04g02175 987 Gene3D Severin 247 354 IPR029006 -
Bva04g02175 987 CDD gelsolin_S5_like 519 609 - -
Bva04g02175 987 Pfam Gelsolin repeat 646 724 IPR007123 -
Bva04g02175 987 Pfam Gelsolin repeat 408 483 IPR007123 -
Bva04g02175 987 Pfam Gelsolin repeat 532 580 IPR007123 -
Bva04g02175 987 Pfam Gelsolin repeat 150 217 IPR007123 -
Bva04g02175 987 Pfam Gelsolin repeat 267 337 IPR007123 -
Bva04g02175 987 Pfam Gelsolin repeat 29 111 IPR007123 -
Bva04g02175 987 Pfam Villin headpiece domain 952 987 IPR003128 GO:0003779|GO:0007010
Bva04g02175 987 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Bva04g02175 987 CDD gelsolin_S3_like 254 343 - -
Bva04g02175 987 MobiDBLite consensus disorder prediction 812 858 - -
Bva04g02175 987 Gene3D Villin headpiece domain 907 987 IPR036886 GO:0003779|GO:0007010
Bva04g02175 987 PANTHER VILLIN-3-LIKE ISOFORM X1 1 987 - -
Bva04g02175 987 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Bva04g02175 987 SMART VHP_1 952 987 IPR003128 GO:0003779|GO:0007010
Bva04g02175 987 SUPERFAMILY Actin depolymerizing proteins 637 745 - -
Bva04g02175 987 CDD gelsolin_S1_like 12 124 - -
Bva04g02175 987 SUPERFAMILY Actin depolymerizing proteins 512 611 - -
Bva04g02175 987 CDD gelsolin_S2_like 138 232 - -
Bva04g02175 987 SUPERFAMILY VHP, Villin headpiece domain 927 987 IPR036886 GO:0003779|GO:0007010
Bva04g02175 987 Gene3D Severin 519 613 IPR029006 -
Bva04g02175 987 Gene3D Severin 614 746 IPR029006 -
Bva04g02175 987 ProSiteProfiles Headpiece (HP) domain profile. 922 987 IPR003128 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02175 Bva-Chr4 20963873 20976399 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02175 - - mnt:21392681 1532.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02175 04 20963873 20976399 Bva13g02410 13 18221985 18234824 BWGD