Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02394 ATGGAACATTATGACACTGCCTTGGCATACCCAGTGCAGTCACCAGGTGTACTTGGAAACCAACCAGACATTGTTATGGACAGCTTGGCTGTACATGGCCTGGGCCTAGTGCACCCAAAGaaagttttcaatttctaCAATGAACTCCATGCTTACTTAGCTTCATGTGGAGTCGATGGAGTGAAAGTTGATGTGCAGAACATTATTGAGACTCTTGGTACTGGACATGGTGGCAGAGTCTCCCTTACACGCAGCTATCATCAAGCACTTGAGGCCTCCATTGCACGTAACTTCACTGATAATGGATGCATTGCATGTATGTGCCACAACACTGATGGGATCTATAGTGCCAAGCAGACTGCTGTTGTGAGAGCGTCGGATGACTTTTATCCCCGTGATCCTGCTTCCCACACCATCCACATTTCATCTGTCGCATACAATACACTTTTCCTTGGGGAGTTTATGCAACCTGACTGGGATATGTTTCATAGTTTACACCCAGCAGCAGAGTATCATGCTGCAGCTCGTGCAGTTGGTGGATGTGCAATTTATGTCAGTGATAAGCCTGGAAACCACAATTTTGATCTTCTTAAGAAGCTTGTTCTCCCTGATGGATCAATTCTTCGTGCTCAATTACCTGGCAGACCCACTCGTGATTGTCTCTTTGCTGATCCTGCAAGAGATGGGACTAGCTTGCTCAAGATATGGAACTTGAACAAATGTTCTGGAGTCGTTGGTATATTTAACTGCCAAGGTGCTGGATGGTGCAAGATAGAGAAGACGACCCGTATCCATGACGCATCTCCTGGTACACTCTCTGGTTCTGTTACTGCAAACGATGTTGACCTCTTCAATCAAGTTGCTGGCGCAGATTGGGATGGCGAGACTATCGTTTATGCCTTCAGATCTGGCGAGGTAATTAGGCTACCAAAACGTGCTTCGGTACCAGTAACATTACAAGTACTAGAATACGAGCTTTTCCATTTCTCTCCAATTAAGGAAATCGCACCAAGTATTTCATTTGCACCAATAGGGTTACTGGATATGTTCAACACTGGAGGAGCTGTGGAGCATGTTGAAATCCATAAATTAGCTAGTGAGAATAAAGCAGCAGAAATATTTGATGGTGAGGTCGTGTCTGAACTGACCACATATCTCAGTTCTGGCCGATCAGCAACAGCAACCATTGGTCTCAGAGTGAGGGGAAGTGGGCGATTTGGTGTATACTCCTCCCAGAGACCTCTCAAGTGTGTGGTGAGTGATACTGAAACAGACTTCAACTACGACTCCGATAATGGATTGATGAGTTTCAGCATCCCAGTTCCTAAGGAGGGAATGCAGACATGGTCCATAGAGATCCAAGTTTG 1367 0.4528 MEHYDTALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGTGHGGRVSLTRSYHQALEASIARNFTDNGCIACMCHNTDGIYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHAAARAVGGCAIYVSDKPGNHNFDLLKKLVLPDGSILRAQLPGRPTRDCLFADPARDGTSLLKIWNLNKCSGVVGIFNCQGAGWCKIEKTTRIHDASPGTLSGSVTANDVDLFNQVAGADWDGETIVYAFRSGEVIRLPKRASVPVTLQVLEYELFHFSPIKEIAPSISFAPIGLLDMFNTGGAVEHVEIHKLASENKAAEIFDGEVVSELTTYLSSGRSATATIGLRVRGSGRFGVYSSQRPLKCVVSDTETDFNYDSDNGLMSFSIPVPKEGMQTWSIEIQV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02394 455 Pfam Raffinose synthase or seed imbibition protein Sip1 1 438 IPR008811 -
Bva13g02394 455 PANTHER - 1 455 IPR008811 -
Bva13g02394 455 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 455 - -
Bva13g02394 455 SUPERFAMILY (Trans)glycosidases 33 200 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02394 Bva-Chr13 18127966 18130128 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02394 1 454 Glycoside Hydrolase AT1G55740 59.341 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02394 K06617 - qsu:111996023 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02188 04 21040712 21047451 Bva13g02394 13 18127966 18130128 BWGD
Bva13g02394 13 18127966 18130128 Bva13g02394 13 18127966 18130128 ECH