Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02188 ATGACGGTGACACCTAAGATCTCTGTTAACGACGGGAACCTGGTTGTTCATGGGAAGAAGATACTGAGCGGAGTGCCGGACAACATCGTGCTGACTCATGGTTCTGGAGCGGGCCTCGCTGCTGGTGCTTTTAATGGTGCCACAACTTCTGACAGCAAAAGCCTTCATGTCTTTCCCATGGGTGTCTTAGATGGTGTCCGGTTCATGTGCTGTTTTCGATTCAAGTTATGGTGGATGACCCAGAGAATGGGAACTTGTGGGAGGGATGTCCCACTGGAGACCCAATTCATGCTTATAGAGAGCAAAGATGAAGAGGATAGTCTGACCATTTACACTGTCTTGCTTCCTCTCCTTGAAGGCCAGTTCCGTGCTGTTCTGCAAGGGAATGACAAGAATGAGATAGAGATTTGCATTGAGAGTGGAGATAATGCTGTTGAGACCAATCAAGGCCTTCACCTTGTCTACATGCATGCTGGGACCAATCCCTTTGAAATCATCAACCAAGCTGTCAAGGCTGTGGAGAAACACTCACAAACTTTTCTTCAtcgagagaagaaaaagTTGCCATCTTTTCTAGACTGGTTTGGCTGGTGCACATGGGATGCTTTCTACACTGATGTCACAGCTGAAGGTGTTAAGGAAGGACTTAAAAGCCTATCAGAGGGAGGTACACCACCACGGTTCCTCATCATAGATGATGGTTGGCAACAGATTGAATCTAAACCGAAGGATGCTGATTGCGTGGTACAAGAAGGAGCACAGTTTGCTACCAGATTAATaggtataaaagaaaatgctaaGTTTCAAAAGAATGGACAGAATAACGAACAGGTTTCAGGCCTGAAGCATGTTGTAGATGAAGCAAAGCAACATCATAACGTCAAATACGTCTATGCATGGCATGCATTAACTGGCTATTGGGGTGGAGTGAAGCCAGCAGCTAGTGGCATGGAACATTATGACACTGCCTTGGCATACCCAGTACAGTCTCCAGGTGTTCTTGGTAACCAACCAGACATTGTCATGGACAGCTTGGCTGTACATGGCCTGGGCCTCGTGCACCCAAAGAAGGTTTTCAATTTCTACAACGAACTCCATGCTTACTTAGCTTCATGTGGAGTAGATGGAGTGAAAGTTGATGTGCAGAACATTATTGAGACCCTTGGTGCTGGACATGGTGGCAGAGTCTCGCTTACACGCAGCTATCATCAGGCACTTGAGGCCTCCATTGCTCGTAACTTCACTGATAATGGATGCATCGCATGTATGTGCCACAACACTGATGGGATCTATAGTGCCAAGCAGACTGCTGTTGTGAGAGCGTCTGATGACTTTTACCCTCGTGATCCTGCCTCCCACACTATACACATTTCATCTGTCGCATACAATACGCTTTTCCTTGGAGAATTTATGCAACCTGACTGGGATATGTTCCATAGTTTACACCCAGCAGCAGAGTATCATGCTGCAGCTCGGGCGGTTGGTGGATGTGCAATTTATGTTAGTGACAAACCAGGAAACCACAATTTTGAACTTCTTAAGAAACTGGTTCTCCCTGATGGATCAATTCTCCGTGCTCAATTACCAGGCAGGCCCACTCGTGATTGTCTCTTTGTTGATCCTGCAAGAGATGGGACTAGCTTGCTCAAAATATGGAACTTGAACAAATGCTCTGGAGTTGTTGGTGTATTTAACTGTCAAGGTGCTGGCTGGTGCAAGGTAACGAAGAATACCCGCATCCATGATGTATCTCCTGGTACACTCTCTGGTTCTGTTACTGCAAATGATGTTGACCTCTTCACTCAAGTTGCTGGTGTAGATTGGGATGGCGAGGCTGTTGTTTATGCCTTCAGATCAGGCGAGGTAATTCGGCTACCAAAAGGTGCTTCGGTGCCAGTAACACTACAAGTTCTAGAATACGAGCTTTTCCATTTCTGTCCAATTAAGGAAATCGCACCCAGTATATCATTTGCACCAATTGGATTACTGGACATGTTTAACGCTGGAGGAGCTGTGGAGCATGTTGAAATCCATAAACTAGCTTGTGAGAATAAAGCAGTAGTGTTTGACGGTGAGATTGTGTCAGAACTGACCACATCTCTCAGTTCTCGCCGACCAGCAACAGCAACTATTGCTCTCACAGTGAGGGGAAGCGGGCGATTTGGTGTATACTCCTCCCAGAAACCACTCAAGTGTGTGGTGGGTGATACTGAAACTGACTTCAACTATGACTCGGCCAACGGATTGATGAGTTTCACCATCCCAGTTGCTCAAGAGGAAATGCACAAATGGTCCATAGAGATCCAAGTTTG 2312 0.4567 MTVTPKISVNDGNLVVHGKKILSGVPDNIVLTHGSGAGLAAGAFNGATTSDSKSLHVFPMGVLDGVRFMCCFRFKLWWMTQRMGTCGRDVPLETQFMLIESKDEEDSLTIYTVLLPLLEGQFRAVLQGNDKNEIEICIESGDNAVETNQGLHLVYMHAGTNPFEIINQAVKAVEKHSQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVKEGLKSLSEGGTPPRFLIIDDGWQQIESKPKDADCVVQEGAQFATRLIGIKENAKFQKNGQNNEQVSGLKHVVDEAKQHHNVKYVYAWHALTGYWGGVKPAASGMEHYDTALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFTDNGCIACMCHNTDGIYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHAAARAVGGCAIYVSDKPGNHNFELLKKLVLPDGSILRAQLPGRPTRDCLFVDPARDGTSLLKIWNLNKCSGVVGVFNCQGAGWCKVTKNTRIHDVSPGTLSGSVTANDVDLFTQVAGVDWDGEAVVYAFRSGEVIRLPKGASVPVTLQVLEYELFHFCPIKEIAPSISFAPIGLLDMFNAGGAVEHVEIHKLACENKAVVFDGEIVSELTTSLSSRRPATATIALTVRGSGRFGVYSSQKPLKCVVGDTETDFNYDSANGLMSFTIPVAQEEMHKWSIEIQV 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02188 770 Pfam Raffinose synthase or seed imbibition protein Sip1 7 753 IPR008811 -
Bva04g02188 770 Gene3D Aldolase class I 193 509 IPR013785 -
Bva04g02188 770 PANTHER - 1 770 IPR008811 -
Bva04g02188 770 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 770 - -
Bva04g02188 770 SUPERFAMILY (Trans)glycosidases 191 516 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02188 Bva-Chr4 21040712 21047451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02188 1 552 Glycoside Hydrolase AT3G57520 83.303 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02188 K06617 - tcc:18598978 1365.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02188 04 21040712 21047451 Bva13g02394 13 18127966 18130128 BWGD
Bva04g02188 04 21040712 21047451 Bva04g02188 04 21040712 21047451 ECH