Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02389 ATGGATGTTGAATGGATGGATGGTCTAAAATGCATGAAGAATGTTCTTATTATGGTTTCAGACAGCAAATTACAAATATGGGTCAATTATTGTGCAAAATGTTGGGATATGTTTCGAGACACTTCCCCAAAAGTTCGTTTTGATTTGAGAGCCATTCGAAAATTCTTGAGGTTTCAAAGCAGAAGAGGCAAGTTGAATACCATTCTGCTTTCATCACCGTCACGgcctaaaaaagaaaaagccaagcttttttttttttttgcacagAGCTTGGAACTTGCTGCTTTACTAAGGCTGAAATTCAGGGTTGCTGGTAGAGATTTTTCTATGGGAGAAGCCCCAGCTTTCCTTGTTGATGACCTCCATGATGGACATGTTAATGGCTTTGATTTGAAAAACGAAACATCCAAAACAGTCACTATTGTTGGTGATAAAAAGTATGTCATTGGTGGAGCTGATGATGAAACTGCGTCTAttgaagttcaaatttttgacCATAATCTTGGAGAATGggTCAAGCCTACTGTGCTTGGTACCAAACCCTTGTCATGCAATTGCCATTCAAGCGTGCTTTTGAATAACGATCGAATACTAATCATTAAGAAGGGCTCTAAGCCGGATGACCATGTATGGTTTCTGGAGGTAGACACCCCATATGTTAGGCAGCAGAAAAAAGCTTTGGGGACCGAGGTTGTTGCCTGGAGCAAGGGAGTTATAGGTAATGCTGAGAAGCCAATTGTTATTAGTGGTCCTTCTGGAGTAGGTAAAGGAACTCTGATATCAATGCTCATGAAGGAATTCCCGTATATGTTTGGTTTTTCTGTGAGCCACACTACTCGAGCACCAAGAGGTATGGAGAAAGATGGGGTCCATTACCATTTTACTGAGAAGAGTGTTATGGAGAAAGATATAAGAGATGGAAAATTTCTTGAGTTTGCCTCTGTTCATGGTAATCTTTATGGGACTAGTGTCGAGGCTGTTGAGCAGGTAGCAGATGCAGGGAAAagatgtattcttgacattgaTGTTCAAGGGGCGAGATCTGTGAAGGCTAGTTCCCTTGAAgcaatattcatttttatctgTCCTCCGTCAATGGAGGAACTGGAGAAGCGCCTCCGTGACAGGGGAACAGAAACAGAAGAACAAATCTTGAAGCGACTGCGAAATGCTAAGGCAGAGATTGAGCAAGGGAAGTCATCAGGCATATTTGACTTCATCCTATACAATGATAACCTTGAGGAATGTTACCAGAGTCTTAAGAAACTCCTTGGACTCAATGGTCATGTCATTGTTCCAACCAAGTCAGCAGCTAGAGAGTTGAATATACCAATGGATCATTCAGTTTCAAAAGTTGATGACAAGATCATCATAAACAACATTTCTCCAGGACCAGAAAAAGAATCTAAGAACTTGATCATGTTGGATGTTTCCGACCTCAAAGGAGGCGCACCTGGACGGACAAGAGGGCTAAATTTTCATGCCATTCACTCATTTTCAGATTGCTTGAATGGAATGGATCAGCTGAGCTA 1532 0.3916 MDVEWMDGLKCMKNVLIMVSDSKLQIWVNYCAKCWDMFRDTSPKVRFDLRAIRKFLRFQSRRGKLNTILLSSPSRPKKEKAKLFFFFAQSLELAALLRLKFRVAGRDFSMGEAPAFLVDDLHDGHVNGFDLKNETSKTVTIVGDKKYVIGGADDETASIEVQIFDHNLGEWVKPTVLGTKPLSCNCHSSVLLNNDRILIIKKGSKPDDHVWFLEVDTPYVRQQKKALGTEVVAWSKGVIGNAEKPIVISGPSGVGKGTLISMLMKEFPYMFGFSVSHTTRAPRGMEKDGVHYHFTEKSVMEKDIRDGKFLEFASVHGNLYGTSVEAVEQVADAGKRCILDIDVQGARSVKASSLEAIFIFICPPSMEELEKRLRDRGTETEEQILKRLRNAKAEIEQGKSSGIFDFILYNDNLEECYQSLKKLLGLNGHVIVPTKSARELNIPMDHSVSKVDDKIIINNISPGPEKESKNLIMLDVSDLKGGAPGRTRGLNFHAIHSFSDCLNGMDQLS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02389 509 CDD GMPK 245 421 - -
Bva13g02389 509 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 110 443 - -
Bva13g02389 509 ProSitePatterns Guanylate kinase-like signature. 278 295 IPR020590 -
Bva13g02389 509 ProSiteProfiles Guanylate kinase-like domain profile. 243 425 IPR008144 -
Bva13g02389 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 424 IPR027417 -
Bva13g02389 509 TIGRFAM guanyl_kin: guanylate kinase 244 424 IPR017665 GO:0004385|GO:0006163
Bva13g02389 509 Pfam Guanylate kinase 243 424 IPR008145 -
Bva13g02389 509 PANTHER GUANYLATE KINASE-RELATED 110 443 - -
Bva13g02389 509 Gene3D - 240 434 IPR027417 -
Bva13g02389 509 Gene3D - 126 239 IPR015915 GO:0005515
Bva13g02389 509 SUPERFAMILY Galactose oxidase, central domain 124 222 IPR011043 -
Bva13g02389 509 SMART gk_7 242 428 IPR008145 -
Bva13g02389 509 Hamap Guanylate kinase [gmk]. 241 428 IPR017665 GO:0004385|GO:0006163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02389 Bva-Chr13 18087811 18092122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02389 K00942 - gmx:100808931 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02196 04 21083704 21087598 Bva13g02389 13 18087811 18092122 BWGD
Bva13g02389 13 18087811 18092122 Bva13g02389 13 18087811 18092122 ECH