Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02196 ATGGTCGCTGGTACAAATTCCTCTATGGGAGAAGCCCCGGCTTTCCTTGTTGATGACCTCCATGGTGAACAGCTTAATGGCTTTGATTTGAAAAACGAAGCATCCAAAACAGCCACTGTCATTGGTGATAAAAAGTATGTCATTGGTGGAGCTGATGATGAAACTGCATTCATTGAAGTTCAAATCTTTGACCATAATCTTGGAGAATGgGTAAATCCCACCGTGCTTGGCAACAAACCCTTGTCATGCAAAGGCCATTCAAGTGTGCTTTTGAATAATGATCGAATACTAATTATTAAGAAGGGTTCTAAGCCAGATGACAGCACATGGTTTCTGGAGGTGGAAACCCCTTATGTTAGGCAGCAGAGAAAAGTTATGGGGACCGAGGTTGTTGCTTGGAGTAAGGGGGTGATAGGTAATGCTGAGAAGCCGATTGTTATCAGTGGTCCTTCTGGAGTAGGTAAAGGAACTCTGATATCAATGCTCATGAAGGAATTTCCATCTATGTTTGGTTTTTCTGTGAGCCACACTACCCGTGCTCCAAGAGGTATGGAGAAAGATGGGGTCCATTACCATTTTACTGAGAAAAGTGTCATGGAGAAAGAGATAAGAGATGGAAAATTTCTTGAGTTTGCTTCTGTTCACGGTAATCTTTATGGGACTAGTGTCGAGGCTGTTGAACAGGTAGCAGATGCTGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGAGCAAGATCCGTGAGGGCTAGTTCCCTTGAAGcgatattcatttttatctgTCCTCCTTCAATGGAGGAGTTGGAGAAGCGCCTCCGTGACAGGGGAACAGAAACAGAAGAACAGATCTTGAAGCGACTGCGAAATGCCAAGGCAGAGATTGAGCAAGGGAAATCATCGGGCatatttgatttcatcttGTACAATGATAACCTTGAGGAATGTTATGAGAATCTTAAGAAACTTTTGGGACTTAATGGTCATGTTGCGGCTCCGACTAAGCCGGCTAGAGAGGTGAATCTACCAATGGATCATTCAGTTTCGAAAATTGACGACAAGATCATCATAAACAGCATTTCTCCAGGACCggaaaaagaatcaaagaaCTTGATCATATTGGATGTTTCCTCCCTCAAAGGAGGCGCGCCGGGACGGACAAGAGGGTTAAATTTTCATGCCATTCATTCGTTTTCAGATGGCTTGAGTGGAATGGACCGGCTGAGCTGCTA 1229 0.4231 MVAGTNSSMGEAPAFLVDDLHGEQLNGFDLKNEASKTATVIGDKKYVIGGADDETAFIEVQIFDHNLGEWVNPTVLGNKPLSCKGHSSVLLNNDRILIIKKGSKPDDSTWFLEVETPYVRQQRKVMGTEVVAWSKGVIGNAEKPIVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKSVMEKEIRDGKFLEFASVHGNLYGTSVEAVEQVADAGKRCILDIDVQGARSVRASSLEAIFIFICPPSMEELEKRLRDRGTETEEQILKRLRNAKAEIEQGKSSGIFDFILYNDNLEECYENLKKLLGLNGHVAAPTKPAREVNLPMDHSVSKIDDKIIINSISPGPEKESKNLIILDVSSLKGGAPGRTRGLNFHAIHSFSDGLSGMDRLSC 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02196 409 Gene3D - 22 130 IPR015915 GO:0005515
Bva04g02196 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 323 IPR027417 -
Bva04g02196 409 SUPERFAMILY Galactose oxidase, central domain 37 122 IPR011043 -
Bva04g02196 409 TIGRFAM guanyl_kin: guanylate kinase 143 323 IPR017665 GO:0004385|GO:0006163
Bva04g02196 409 CDD GMPK 144 320 - -
Bva04g02196 409 Gene3D - 138 328 IPR027417 -
Bva04g02196 409 SMART gk_7 141 327 IPR008145 -
Bva04g02196 409 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 9 347 - -
Bva04g02196 409 Hamap Guanylate kinase [gmk]. 140 327 IPR017665 GO:0004385|GO:0006163
Bva04g02196 409 ProSiteProfiles Guanylate kinase-like domain profile. 142 324 IPR008144 -
Bva04g02196 409 ProSitePatterns Guanylate kinase-like signature. 177 194 IPR020590 -
Bva04g02196 409 Pfam Guanylate kinase 142 323 IPR008145 -
Bva04g02196 409 PANTHER GUANYLATE KINASE-RELATED 9 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02196 Bva-Chr4 21083704 21087598 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02196 K00942 - gmx:100808931 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02196 04 21083704 21087598 Bva13g02389 13 18087811 18092122 BWGD
Bva04g02196 04 21083704 21087598 Bva04g02196 04 21083704 21087598 ECH