Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02289 ATGCTAAGCGTGCTACGTGTGCACCTCCCCTCTGAAATACCTATTGTAGGCTGTGAGCTCACGCCGTACGTTCTTTTACGGCGACCCGACAAGACTGTCTCCACCGACGATGTTCCTGAGACGGCCCCATTGGATGGCCATTTCCTGAGATACAAGTGGTATCGTGTACAAAGTGATAGAAAGATTGCTCTCTGTAGCGTACATCCATCTGAGCAGGCCACGTTACAGTGCCTAGGTTGTGTCAAGGCTAAAATTCCTGTCGCCAAAAGTTACCATTGCACCCCAAAATGTTTTTCGGATGCATGGCAACATCATCGTGTTTTACATGACCGTGCTGCAAGTGCAgtgaatgaaaatggaaatgaggAGGAGGAATTATTTGGGCGCTTTAACAGTTCTGGATCTGGGGTAATCAACAGCAGCTTATCTGGCTCTGCATCAAGTGCTAATTTGACAAATGGATCGGCACCCTTGTATCCAGCAGCTGTTACACAGCGAAGTGGTGGAGAAACTTGGTTTGAAGTTGGACAATCCAAGACATACACCCCAACAGCTGATGATGTTGGTCATGTCCTTAAATTTGAGTGTGTTATAGTTGATGCAGAGACAAAACTTCCTACGGGGCATGTTAACACTATACTAACTTCTCGTGTCATTCCTGCACCCTCCCCAAGTCCGCGTCGCTTGGTACCTGTTGATGGAATGGGGCATTTAGATGCAGATGGACGTATAACATCATCTGGAACTTTTACAGTTCTATCATACAATATTTTGTCTGATGCATATGCTTCAAATGATTTATACAGTTATTGTCCTTCATGGGCTCTTTCTTGGCCATATCGGAGGCAAAATTTGTTAAGAGAAATAGTGGGTTATCGTGCAGATATTATTTGCCTTCAGGAGgTACAAAGTGACCATTATGAGGAATTTTTTGCCCCTGAACTTGACAAGCATGGCTATTATGGTCTattcaagagaaaaacaaCTGAGGTGTACAATGGCAACATGAATACAATTGATGGTTGTGCAACATTTTTCCGCAGAGACAGATTTTCACATGTGAAAAAATATGAGGTTGAATTTAATAAAGCTGCTCAGTCTTTGACAGATGCTATGATTCCAACCACTCAGAAGAAAGTTGCTTTGAATCGGTTGGTCAAGGATAATGTTGCACTAATAGTGGTTCTAGAAGCGAAAGTTAACAGTCAGCCGGTTGATAATCCGGGGAAAAGGCAGCTTCTTTGTGTGGCAAACACACATGTAAACGTCCACCAAGAATTAAAGGATGTCAAACTCTGGCAGGTGCATACTCTCTTAAAAGGGTTGGAGAAAATAGCTGCAAGTGCAGATATTCCAATGTTGGTTTGTGGAGATTTTAATTCAGTTCCTGGAAGTGCTCCTCATGCACTTCTTGCAATGGGGAAGGTTGATCCATTGCATCCAGATTTAGCAGTTGACCCACTTAGTATCTTACGCCCTCACAGCAAGTTGGTTCATCAGTTGCCACTGGTTAGTGCTTACTCAGCCTTTGGAAGAACAGTAGGTCTTGGATTTGAGCAACATAAAAGGCGACTGGACAGCACAACAAATGAACCTTTATTCACAAATGTCACTAGAGATTTTATTGGCACTCTAGATTACATTTTTTACACGGCGGATTCGTTGGTGGTGGAGTCCTTGTTGGAGCTATTGGACGAGGAGAGTTTGAGGAAAGACACAGCACTTCCTTCTCCTGAATGGTCCTCAGATCATATAGCACTTTTAGCTGAATTTCGCTGCTGCAAGACTAGATCTAGGCGTTG 1802 0.4267 MLSVLRVHLPSEIPIVGCELTPYVLLRRPDKTVSTDDVPETAPLDGHFLRYKWYRVQSDRKIALCSVHPSEQATLQCLGCVKAKIPVAKSYHCTPKCFSDAWQHHRVLHDRAASAVNENGNEEEELFGRFNSSGSGVINSSLSGSASSANLTNGSAPLYPAAVTQRSGGETWFEVGQSKTYTPTADDVGHVLKFECVIVDAETKLPTGHVNTILTSRVIPAPSPSPRRLVPVDGMGHLDADGRITSSGTFTVLSYNILSDAYASNDLYSYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYEEFFAPELDKHGYYGLFKRKTTEVYNGNMNTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTTQKKVALNRLVKDNVALIVVLEAKVNSQPVDNPGKRQLLCVANTHVNVHQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPLHPDLAVDPLSILRPHSKLVHQLPLVSAYSAFGRTVGLGFEQHKRRLDSTTNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKTRSRR 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02289 600 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 34 595 - -
Bva13g02289 600 Pfam Endonuclease/Exonuclease/phosphatase family 253 584 IPR005135 GO:0003824
Bva13g02289 600 CDD Deadenylase_CCR4 252 593 - -
Bva13g02289 600 Gene3D Endonuclease/exonuclease/phosphatase 220 599 IPR036691 -
Bva13g02289 600 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 1-LIKE 34 595 - -
Bva13g02289 600 SUPERFAMILY DNase I-like 246 594 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02289 Bva-Chr13 17535210 17542248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02289 K12603 - gmx:100775270 1099.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02282 04 21551335 21556423 Bva13g02289 13 17535210 17542248 BWGD
Bva13g02289 13 17535210 17542248 Bva13g02289 13 17535210 17542248 ECH