Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02282 ATGCTGAGCGTGCTACGTGTGCACCTCCCCTCTGATATACCCATTGTAGGCTGTGAGCTCACGCCGTATGTGCTTTTACGGCGACCCGACAGTCCTGTTACCACCGAGGATGTTCCTGAAACAGCCCCATTGGATGGCCATTTCCTGAGATACAAGTGGTATCGTGTACAAAGTGATAAAAAGGTCGCCGTCTGTAGCGTACATCCGTCTGAGCAGGCCACATTGCAGTGCCTAGGTTGTGTGAAGGTTAAAATACCTGTTGCTAAAAGTTACCATTGCACCCCAAAATGTTTTTCAGATGCATGGCAACATCATCGTGTTTTACATGACCGTGCTGCTAGTGCAGTGAATGAAAATGGGAACGAGGAGGAGGAATTATTTGGGCGCTTTAATAGTTCTGGATCTGGGGTAATCAACAACAGCTTATCTGGCTCCGCATCAAGTGCTAGCTTGACAAATGGGTCAGCGCCCTTGTATCCTGCAGCTGTTACACAGCGAAGTGGTGGGGAAACTTGGTTTGAGGTTGGACGATCCAAAACGTATACCCCAACAGCTGATGATGTTGGTCACGTCCTTAAATTTGAGTGTGTTGTTGTTGATGCGGAGACAAAACTTCCCGTGGGGCATGTTAACACTATACTAACCTCTCGAGTCATTCCTGCTCCTTCCCCTAGTCCACGTCGCTTGATACCTGTTGATGGAATGGGGCATTTAGATGTAGATGGACGTATAACATCATCTGGAACTTTTACTGTTCTATCATACAATATATTGTCTGATACATATGCTTCAAATGATTTATATGGTTACTGCCCTTCATGGGCTCTCTCTTGGCCATATCGGAGGCAAAATTTGTTAAGAGAAATAGTTGGTTACCGTGCTGATATTATTTGTCTTCAGGAGgTTCAAAATGACCATTATGaggaatttttttcccctgaaTTGGACAAACATGGCTATTATGGTCTatacaagagaaaaacaaatgagGTGTTTGGAAACACTGGTATGCTTGATGGTTGTGCAACATTTTTTCGCAGAGATAGATTTTCTCATGTGAAAAAATATGAGGTTGAATTTAATAAAGCTGCTCAGTCATTGACAGATGCTATGGTTCCAACCACTCAGAAGAAATCTGCTTTGAATCGGCTAGTCAAGGATAATGTTGCACTGATAGTGGTTCTAGAAGCAAAAGTTAATAATCAGCCAGTTGATAATCCTGGGAAAAGACAGCTTCTTTGTGTGGCAAACACACATGTAAACGTCCCCCAAGAATTAAAGGATGTCAAACTCTGGCAGGTGCATACTCTCTTAAAAGGGTTGGAGAAAATAGCTGCAAGCGCGGATATTCCAATGTTGGTTTGTGGAGATTTTAACTCAGTTCCTGGAAGTGCTCCTCATGCACTTCTTGCAATGGGGAAGGTTGATCAATTGCATCCGGATTTAGCAGTTGACCCGCTTAATATATTGCGCCCTCACAGCAAGTTGGTTCATCAGTTGCCACTGGTTAGTGCTTATTCGTCCTTTGCAAGAACATTGGGTCTTGGATTTGAGCAACATAAAAGGCGACTGGACAGCACAACGAATGAACCTTTATTCACTAATGTCACTAGAGATTTTATTGGCACTCTAGATTACATTTTTTACACAGCGGATTCGTTGGTGGTGGAGTCATTGTTGGAGCTATTGGATGAGGAGAATCTAGGCGTTGACACTTTAAGGTCAGATCCAGAGACACGTAAAGAAAAAGCTTA 1754 0.4242 MLSVLRVHLPSDIPIVGCELTPYVLLRRPDSPVTTEDVPETAPLDGHFLRYKWYRVQSDKKVAVCSVHPSEQATLQCLGCVKVKIPVAKSYHCTPKCFSDAWQHHRVLHDRAASAVNENGNEEEELFGRFNSSGSGVINNSLSGSASSASLTNGSAPLYPAAVTQRSGGETWFEVGRSKTYTPTADDVGHVLKFECVVVDAETKLPVGHVNTILTSRVIPAPSPSPRRLIPVDGMGHLDVDGRITSSGTFTVLSYNILSDTYASNDLYGYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQNDHYEEFFSPELDKHGYYGLYKRKTNEVFGNTGMLDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMVPTTQKKSALNRLVKDNVALIVVLEAKVNNQPVDNPGKRQLLCVANTHVNVPQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDQLHPDLAVDPLNILRPHSKLVHQLPLVSAYSSFARTLGLGFEQHKRRLDSTTNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEENLGVDTLRSDPETRKEKA 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02282 584 Pfam Endonuclease/Exonuclease/phosphatase family 253 566 IPR005135 GO:0003824
Bva04g02282 584 Gene3D Endonuclease/exonuclease/phosphatase 221 577 IPR036691 -
Bva04g02282 584 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 34 579 - -
Bva04g02282 584 CDD Deadenylase_CCR4 252 552 - -
Bva04g02282 584 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 1-LIKE 34 579 - -
Bva04g02282 584 SUPERFAMILY DNase I-like 248 554 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02282 Bva-Chr4 21551335 21556423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02282 278 475 EF-hand Containing Proteins AT5G54130 25.714 1.94e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02282 K12603 - gmx:100775270 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02282 04 21551335 21556423 Bva13g02289 13 17535210 17542248 BWGD
Bva04g02282 04 21551335 21556423 Bva04g02282 04 21551335 21556423 ECH