Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02081 ATGGAGGCCGGAGAAAGAGGCAGAGAGGAGCAACAAACGCAGATTCCTTGGATCCCCACCACTCCTCTTAAGCCAATTCAGGCGAAACCAGTGCCGATCTGCGGTTCTGGAGAAAGAAACCAACTGAACCAGACAGATTTCCTGGGAGCAAGCTCGTGCTGTAATTCATCTGATGATTCTCATGCTAATAGGGTATCTGCATGCTTTGAGACTGCAGATATAAACAGCAGGCTCCATGACCCGGAAGCACCTGCAGCTGCTGGAACCAACATTGCTGGTGAAAACTCTGGAACATGTCCACAGATGTTCCGGAACTCCATGTCCAGATGGGCTAATACTGGCTGTACAGAACTATTGGCTCTAGCAGAGGCCGCATCAGCAGCACATTTCAGTGCAACACATGATGGAGTTGAGAGTCCATTTATTCTCACTTCTCAGTCACAGCTGAACAGAGACCCTGCAGCCAACCTAAGTAGCTTGGTTACCCCTCACGATTTCTCTCCTCAACAGACTCAGACTGAAATCATTCATGTCAATCCTCAAGAACCTAAGGGCACAACATCCGTTGCTTTTTGTAGCAAAACCGTTTCACAGGTTGCACCACCTACACCGGATAAGGCCTTTAGAGCAGAAGACAGACAACTTGCAGGATTGCAGGTCAATATAGAAGAAGCAGCTGAAGGGGAAATGAATAATGTCACTGCTACAAAGCTTGACAACAACGGAACCTCACAATACCAGATCTCTGATTCTGTCACGGATATATCATTTGCTGCTGTTTCAACGCCAATAAAGGAGAATCACAACCCTCACAGGGGAGAAATTGAAGCGATCGATCTGAATAAAACACCACAGCAAAAAGCAAGGAGAAAGAAGCACCGTCCAAAGGTCATCTCAGAAGGCAAACCCAAAAGAACTCCCAGGCCGGTTACCCCAAAGCCTGCTCAATCAGAAAAAAACACTGGAAAGAGGAAGTATGTGAGAAGGAAAGGATTAAGCAAGACTCCCACAACACCTTCATCAGAGGCGACAGGGCAACCAACTGAGTCAATAATGCCTGAATCTACCAAAAAGTCGTGTAGGAGGGccttaaattttgaaagtacAGAACAACAGATAGATGAAAATTCTACATGTAAAGAAAATGATGCAAGAATGCATCTTGGTAAAGGGGTTTCACCACCTGAAGGCATACAAGCCCCAAGTATGTCTCATCCAAAATACGATTCTCCTCTGGCAGAGCCTAATGCAAATActataaagagaaagaggaagagaaaaagtgAGGTGATGCTGAGCCCAAATGATGCCAACAGCAACAATGGTGGAGTTTCGACAACAGGATTACAAATGGATGATTCCAAGAGAAAACACTCTGCTACTATGGAAAATACTGATACCAGCAGCATGAATCTAACTGGAGCACGCTATAATGGCCTGCATGCATACCAAGGAGCGTTTCTTCAGTTTCCAAATAtccagaagaagagaagaagcgGAAAGGGACAGATCTCCAGGATATCAAATTTGACTGCACTAGCAGCACGGGCCCAAGAAAATGCCAGAGCACATACTTATGCGTCAAGTTCCCATAGCTGGAATTTTGGTTCTGAATATAATGCAGCTCGAGTTCCAATCACAATTGAAGATGCTGTTCATAATAAAGCTCAAACGTTTGAGCGCATCTTGTCAATTCAGAATCAGACAAAGCAAACCAAAAGACGATCCAGAGTGTCTACTAAAGTTAATCGTTCCAACAAACAACTAGGAAATGATGACAAGCAAGTATTTCAGAATGCAGAAATACCCACATCCATTGATGCTTTAGTAGCAGAGATGAGAGCATCGCATCAGAAAAAGAAGCGAACTATAAAGAGAAGCAGCCTTGTCAATTCAGCATATTCTCGCTCAAATGAAATGTATATGCTCCAGAGTCTTAGCTTGCTCAATTCAGAAGCCCTTCAAAATGTACCGTTGGAAGATAAGATGGAGGCATTAGGAGAGATATTCAGACATCTAGACATAAACAAAGAAGATAGAGATTTAGCAAGTGAAGAGCAGAACGCTCTGGTCCTTTATAACGCACAAATACAAAAGCACAATGCTCTTGTTTGTGCAGGAGGTGGCACGATGATACCCTTCGATAGCTCATTTGATCCCATCAGAAAACAACGCCCACGCCCAAAAGTTGACCTTGATGAGGAGACTAATAGAGTGTGGGCGCTTTTGATGTCAAATATAAACAATGATGGGATTGATGGCAATGATGAAGACAAGGCAAAATGGTGGGAAGAAGAACGGAGAGTGTTTCGTGGAAGAGCAGATTCATTTGTTGCACGGATGCGTCTTGTACAAGGTGATAGGCGCTTCTCTCCATGGAAAGGATCAGTTGTCGATTCAGTGGTCGGAGTTTTCCTCACACAGAATGTTTCAGACCATCTTTCAAGTTCTGCATTCTTGTCACTTGCTGCTAAATTTCCCCTTAAATCTAGCATCAAGTGCAAAAGACACAATGAGGAAGGCGCGAGTTTGGTAGTCATTGAGGAACCAGAAGAGAATGCACAATGGGATGAAAAGATATTGAATGGATCTGTTTATGATGAGAACTCTATGACAATAGACATAGTTGAGCGTTCTGAAGAAAAAGATGTCAACAGCAATTCTATTGGCGCCACCACTGAAGAAGGGCAAGAAAAATCAGATTATGGAGTGGGGAAAGGCTTACATGATGTGGTCTCATCCCAATGTTCTGTCATCTCATCTCAAATATCAGGAGACTTTTCAGTTGATCAAAATCCTGAGAAGCTATGGTCTTGTACAGATAGCAATTCAGAAGTAGAGGAGCTCTCTAGCACAGCCAAGTACAACCTTTTTGACAACAGCACTTCTTTCAGTAAGCTTTTACAATTACAACTGGCAAGTTCAACCATGTTACATGAAGTTACTAGTCAGAGAATCGGGCCATCTGTTAACTTGAAGCACACATATGGTCAATCTACAGAAAACTTGGAAAAATCAGATTCTATACAAGGCTCCTTAGAAGCATCCATGAGCCCTTCCAATGATTATACTCTGACAGTGACCCACAACTCAGGAGTACTTGAAGTTCACTGCTTCGATCATTTCAAAAGAGAAGCCTCATCAAGTGGCCTCTCAAATAATAAAGATGCGAATGATATGAACAAACCAAGTTTACAAATAACAGAGTCTGGAGACCAAGCTGCAACTGTCCATTCTCAAAATACGCTATCTCTACTACGTCAGgaacaaaacaataaactgCAGCAAAACTTGCTCTGCATTTCTGGACAAACCAAAGAGGAGAAGGCAACAGAGTTAGATTCATCTAATGACAACTATGctgtgacaaaagaaaccgAAGAGATCAATGCAGCAACTACGAAATCAAAAGACAAGAGGcctggaaagaagaaagaaaatattaactgGGATAGTTTAAGAGTAGAAGCAGAAGTCAGGGcagggaaaagagaaaggacaATCGAAAACATGGACTCCTTGGACTGGGATGCTTTAAGATGTGCAAATGTCAATGAAATTGCAGACGCCATCAAGGAAAGAGGAATGAATAACATGCTAGCCGATCGTATCAAGAATTTCTTGAATCGGCTGGTTCAAGATCATGGAAGCATTGACTTGGAGTGGTTAAGGGATGTTGAACCCGACCAGGCAAAAGAATATTTACTAAGCATAAGAGGGCTCGGATTGAAAAGTGTGGAGTGCGTGCGGCTTTTGACTCTACACCATCTTGCCTTCCCGGTGGATACAAATGTTGGACGTATCGTGGTACGATTGGGATGGGTACCCCTCCAGCCACTGCCTGAGTCACTACAGTTGCATCTTTTAGAATTGTACCCAGTACTGGAATccatacaaaaatatctttggCCCCGACTATGCAAGCTGGACCAAAATACATTGTATGAGTTGCACTACCAGATGATTACATTTGGAAAGGTCTTTTGCACGAAAAGCAAACCAAATTGCAATGCTTGCCCAATGAGAGGAGAATGCAGACACTTCGCAAGTGCATTTGCAAGTGCAAGGCTTGCCCTACCAGGACCAGAGCAAAGGAGTATAATTAGCACAACAGGAGACAATGCAACTAATCAGAACCCCTCTGTCATAATTAGTCAGGTGCCCTTGCCGCTCCCTGAATATGCAAATCAACCAGAAGAAATTCAACTAGCAGAAGTCAGCAAACAACTAGAAGCAAGACCAGGAATAAATATATGCCAACCTATTATTGAAGAGCCAGCAACCCCGGAGCCAGAGCCAGTacaaatattagaaaatgatATAGAGGATAGCGTCTGTCAGGACCCTTGTGAAATTCCTACCATCAAAATTAACTTCGAAGAGTTCACtctaaatttacaaaattatatgcaaCATAACATGGAGCTTCAAGAAGGAGAGATGTCGAAGGCCTTGGTTGCTTTAGATCCAGAAGCTACTTCCATTCCTATGCCCAAGCTAAAGAATGTGAGCAGATTACGAACAGATCATTGTGTTTATGAACTTCCGGATGATCATGCTCTTCTAGAGGGGTGGGACAGGCGAGAAACTGATGATCCATGCCATTACCTTCTCGCTATATGGACTCCAGGTGAGACAGCAAATTCTATACAGCCACCTGATAGTAAATGCAGCTCCCAAGAATGTGGCCAACTGTGTAACGAGAAGGAATGTTTCTCGTGCAATAGCATTCGTGAAGCAAATATGCAGATAGTTCGAGGGACAATCCTGATACCATGTCGAACAGCTATGAGGGGAAGGTTCCCATTAAATGGAACCTATTTTCAAGTCAATGAGGTATTTGCTGACCATGATTCAAGTCTTAACCCAATCAACGTTCCCCGAGGTTCTATCTGGAATCTAAGAAGGCGAACAGTATATTTTGGAACCTCCATCCCAACAATATTCAAAGGTTTATCAACACAAGAAATTCAACACTGCTTTTGGAGAGGACATGTCTGTGTGAGGGGATTTGACAGGAAAACACGAGCGCCCCGTCCTTTGATGGCTAGACTACATTTCCCGGCTAGCAAGTTGGCCAAGAACAAAGAGCAGACAGATAGCAAGTA 5108 0.417 MEAGERGREEQQTQIPWIPTTPLKPIQAKPVPICGSGERNQLNQTDFLGASSCCNSSDDSHANRVSACFETADINSRLHDPEAPAAAGTNIAGENSGTCPQMFRNSMSRWANTGCTELLALAEAASAAHFSATHDGVESPFILTSQSQLNRDPAANLSSLVTPHDFSPQQTQTEIIHVNPQEPKGTTSVAFCSKTVSQVAPPTPDKAFRAEDRQLAGLQVNIEEAAEGEMNNVTATKLDNNGTSQYQISDSVTDISFAAVSTPIKENHNPHRGEIEAIDLNKTPQQKARRKKHRPKVISEGKPKRTPRPVTPKPAQSEKNTGKRKYVRRKGLSKTPTTPSSEATGQPTESIMPESTKKSCRRALNFESTEQQIDENSTCKENDARMHLGKGVSPPEGIQAPSMSHPKYDSPLAEPNANTIKRKRKRKSEVMLSPNDANSNNGGVSTTGLQMDDSKRKHSATMENTDTSSMNLTGARYNGLHAYQGAFLQFPNIQKKRRSGKGQISRISNLTALAARAQENARAHTYASSSHSWNFGSEYNAARVPITIEDAVHNKAQTFERILSIQNQTKQTKRRSRVSTKVNRSNKQLGNDDKQVFQNAEIPTSIDALVAEMRASHQKKKRTIKRSSLVNSAYSRSNEMYMLQSLSLLNSEALQNVPLEDKMEALGEIFRHLDINKEDRDLASEEQNALVLYNAQIQKHNALVCAGGGTMIPFDSSFDPIRKQRPRPKVDLDEETNRVWALLMSNINNDGIDGNDEDKAKWWEEERRVFRGRADSFVARMRLVQGDRRFSPWKGSVVDSVVGVFLTQNVSDHLSSSAFLSLAAKFPLKSSIKCKRHNEEGASLVVIEEPEENAQWDEKILNGSVYDENSMTIDIVERSEEKDVNSNSIGATTEEGQEKSDYGVGKGLHDVVSSQCSVISSQISGDFSVDQNPEKLWSCTDSNSEVEELSSTAKYNLFDNSTSFSKLLQLQLASSTMLHEVTSQRIGPSVNLKHTYGQSTENLEKSDSIQGSLEASMSPSNDYTLTVTHNSGVLEVHCFDHFKREASSSGLSNNKDANDMNKPSLQITESGDQAATVHSQNTLSLLRQEQNNKLQQNLLCISGQTKEEKATELDSSNDNYAVTKETEEINAATTKSKDKRPGKKKENINWDSLRVEAEVRAGKRERTIENMDSLDWDALRCANVNEIADAIKERGMNNMLADRIKNFLNRLVQDHGSIDLEWLRDVEPDQAKEYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIVVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQNTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEQRSIISTTGDNATNQNPSVIISQVPLPLPEYANQPEEIQLAEVSKQLEARPGINICQPIIEEPATPEPEPVQILENDIEDSVCQDPCEIPTIKINFEEFTLNLQNYMQHNMELQEGEMSKALVALDPEATSIPMPKLKNVSRLRTDHCVYELPDDHALLEGWDRRETDDPCHYLLAIWTPGETANSIQPPDSKCSSQECGQLCNEKECFSCNSIREANMQIVRGTILIPCRTAMRGRFPLNGTYFQVNEVFADHDSSLNPINVPRGSIWNLRRRTVYFGTSIPTIFKGLSTQEIQHCFWRGHVCVRGFDRKTRAPRPLMARLHFPASKLAKNKEQTDSK 1702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02081 1702 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 431 888 IPR044811 GO:0019104|GO:0035514|GO:0080111
Bva13g02081 1702 MobiDBLite consensus disorder prediction 333 354 - -
Bva13g02081 1702 Pfam Permuted single zf-CXXC unit 1553 1584 IPR028924 -
Bva13g02081 1702 Gene3D Hypothetical protein; domain 2 1164 1256 - -
Bva13g02081 1702 MobiDBLite consensus disorder prediction 264 358 - -
Bva13g02081 1702 PANTHER ROS1, PUTATIVE-RELATED 1 317 - -
Bva13g02081 1702 PANTHER ROS1, PUTATIVE-RELATED 1104 1698 - -
Bva13g02081 1702 SUPERFAMILY DNA-glycosylase 772 1350 IPR011257 GO:0003824|GO:0006281
Bva13g02081 1702 MobiDBLite consensus disorder prediction 432 450 - -
Bva13g02081 1702 Gene3D - 1257 1345 IPR023170 -
Bva13g02081 1702 Pfam RRM in Demeter 1587 1687 IPR028925 -
Bva13g02081 1702 MobiDBLite consensus disorder prediction 877 902 - -
Bva13g02081 1702 SMART ccc3 1328 1348 IPR003651 GO:0051539
Bva13g02081 1702 PANTHER ROS1, PUTATIVE-RELATED 319 384 - -
Bva13g02081 1702 SMART endo3end 1132 1327 IPR003265 GO:0006284
Bva13g02081 1702 MobiDBLite consensus disorder prediction 568 588 - -
Bva13g02081 1702 CDD ENDO3c 1175 1293 IPR003265 GO:0006284
Bva13g02081 1702 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1 317 IPR044811 GO:0019104|GO:0035514|GO:0080111
Bva13g02081 1702 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 319 384 IPR044811 GO:0019104|GO:0035514|GO:0080111
Bva13g02081 1702 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 907 1093 IPR044811 GO:0019104|GO:0035514|GO:0080111
Bva13g02081 1702 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1104 1698 IPR044811 GO:0019104|GO:0035514|GO:0080111
Bva13g02081 1702 MobiDBLite consensus disorder prediction 392 470 - -
Bva13g02081 1702 PANTHER ROS1, PUTATIVE-RELATED 907 1093 - -
Bva13g02081 1702 PANTHER ROS1, PUTATIVE-RELATED 431 888 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02081 Bva-Chr13 16493226 16503944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02081 - - gmx:100787368 1654.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02471 04 22520464 22530108 Bva13g02081 13 16493226 16503944 BWGD
Bva13g02081 13 16493226 16503944 Bva13g02081 13 16493226 16503944 ECH