Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02065 ATGGGGGCCTCGCTATCCAACCTGGGAGCAAATGGCTCCACCATCGGTCCAGGCCTAGGGGACATCCCGGAGAGCTGCGTGGCTTGCGTTTTTCTGTATTTGACTCCGCCGGAGATATGCAATTTGGCCCGGTTGAATCGAGCTTTTCGTGGTGCCGCGTCTGCTGATTCCGTGTGGGAAGCAAAGTTGCCCCCTAATTACCAAGATCTGCTCGGTTTAATGCCTCCTGAAAGGTACCAGAATTTGTTGAAGAAAGACATATTCGCGCTACTATCTCGACCTGTACCCTTTGATGATGACAATAAGGTGGGTGCTCTCCAGGAAGTATGGCTGGACAGGGTCACGGGAAGGGTTTGCATGTCCATATCAGCAAGAGCGATGGCGATTACTGGAATTGACGACAGGAGATACTGGAATTGGATTCCTACAGAAGAATCTAGGTTCCATACTGTGGCTTATTTACAGCAAATATGGTGGTTTGAAGTCGACGGAGAGGTAAAATTTCCATTCCCCGCGGATATTTATACTCTTTTCTTCAGGCTTCACCTTGGAAGATTTTCCAAAAGGCTTGGACGGCGGGTAAGCTATCATGAACACACCCATGGTTGGGTTATAAAACCAGTGAGATTTGAGATGTCAACTTCAGATGGTCAGCAATCATCATGCGAATGTTGTTTGGATGATACCGAGCATGATGACACATATGGCAATCATAAGCGTGGATATTGGATAGACTACAAGGTAGGTGAGTTTATTGTTAGTGGATCAGAACCTACAACTCAAGTTAGATTCTCCATGAAACAGATCGATTGTACACATTCCAAAGGCGGCCTTTGTGTAGATTCTGTATTTATTATACCTAGCGATTTGAGAAATGGTAAGAGAAGAGGCATTTTTAAATA 902 0.4545 MGASLSNLGANGSTIGPGLGDIPESCVACVFLYLTPPEICNLARLNRAFRGAASADSVWEAKLPPNYQDLLGLMPPERYQNLLKKDIFALLSRPVPFDDDNKVGALQEVWLDRVTGRVCMSISARAMAITGIDDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVKFPFPADIYTLFFRLHLGRFSKRLGRRVSYHEHTHGWVIKPVRFEMSTSDGQQSSCECCLDDTEHDDTYGNHKRGYWIDYKVGEFIVSGSEPTTQVRFSMKQIDCTHSKGGLCVDSVFIIPSDLRNGKRRGIFK 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02065 300 SUPERFAMILY F-box domain 17 70 IPR036047 GO:0005515
Bva13g02065 300 Pfam Phloem protein 2 118 287 IPR025886 -
Bva13g02065 300 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 296 - -
Bva13g02065 300 PANTHER F-BOX PROTEIN PP2-A15 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02065 Bva-Chr13 16388813 16392295 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02065 - - vra:106772440 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02488 04 22607068 22610163 Bva13g02065 13 16388813 16392295 BWGD
Bva13g02065 13 16388813 16392295 Bva13g02065 13 16388813 16392295 ECH