Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02488 ATGGGGGCCTCGCTGTCCAACCTGGGGGCAAATGGCTCCACCATCGGTCCAGGCCTCGGGGACATACCGGAAAGCTGTGTGGCTTgtgtttttctatatttgaCTCCGCCGGAGATATGCAATTTGGCGCGGCTGAATCGAGCTTTTCGTGGGGCCGCGTCTGCTGATTCCGTGTGGGAAGCTAAGTTGCCCCCTAATTACCAAGATCTGCTCGTTTTAATGCCTCCTGAAAGGTACCGGAATTTGTCGAAGAAGGACATATTCGCGCTACTATCTCGACCTGTACCCTTTGATGATGGCAATAAGGTGGGTGCTCTGCAGGAAGTATGGCTAGACAGGGTCACGGGAAGGGTTTGCATGTCCATATCAGCAAAGGCGATGGCGATTACTGGAATTGATGACCGGAGATACTGGAATTGGATTCCTACCGAAGAATCTAGGTTCCATACTGTGGCTTATTTGCAGCAAATATGGTGGTTTGAAGTGGACGGGGAGGTTAAATTTCCATTTCCTGCAGATATTTATACTCTTTTCTTCAGGCTTCATCTTGGTAGATTTTCCAAAAGGCTTGGGCGGCGCGTAAGCTATTATGAACACACTCATGGTTGGGATATAAAACCAGTGAAATTTGAGATGTCAACTTCAGATGGTCAGCAATCATCATGTGAATGCTTTTTGGATGATACTGAGCACGATGACACATACGGCAATCATAAGCGTGGATTCTGGATAAACTACAAGGTAGGCGAGTTTAATGTCAATGGATCGGAACCTACAACTGAAGTCAGATTCTCCATGAAACAGATTGATTGTACACATTCCAAAGTGATGTTAGGTATCTCAAAATACTCTGTTGGGGTCTTTTCATACATCTTATACTTCTG 884 0.4536 MGASLSNLGANGSTIGPGLGDIPESCVACVFLYLTPPEICNLARLNRAFRGAASADSVWEAKLPPNYQDLLVLMPPERYRNLSKKDIFALLSRPVPFDDGNKEVWLDRVTGRVCMSISAKAMAITGIDDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVKFPFPADIYTLFFRLHLGRFSKRLGRRVSYYEHTHGWDIKPVKFEMSTSDGQQSSCECFLDDTEHDDTYGNHKRGFWINYKVGEFNVNGSEPTTEVRFSMKQIDCTHSKVMLGISKYSVGVFSYILYF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02488 289 Pfam Phloem protein 2 113 275 IPR025886 -
Bva04g02488 289 PANTHER F-BOX PROTEIN PP2-A15 1 278 - -
Bva04g02488 289 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 278 - -
Bva04g02488 289 SUPERFAMILY F-box domain 17 88 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02488 Bva-Chr4 22607068 22610163 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02488 - - vra:106772440 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02488 04 22607068 22610163 Bva13g02065 13 16388813 16392295 BWGD
Bva04g02488 04 22607068 22610163 Bva04g02488 04 22607068 22610163 ECH