Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02060 ATGGCGTCCTCAAGGCAATTCAAGGAAGAACGAGCTGAAGCAGCTGCCAAGCTCGCCGCTGAAGAGCTTAAAGACGCTAACAGAGAACTAGAGCGTGAGGAGAGGAACAAGTTGGGAATTACGGAGCAGGAGCAGGagcagcaacagcagcagAGGCCCGGTGTTATAGGGTCCATGTTAAGGGCAGTGCACGACACTTACGAGCATGCCAAGGAAGCTGTGGTTGGAAAGGGTCATGAAGGCGCGGACACCACAAGGGAAAACATCTATGTCGTCGAGGATAAAGGAGGGGAGGTGAGAGACACAGCAGCCGACAAGTCTCGTGGAGCTTATGATTCTACCTCGGACAAGGTTAAGGAGACAACAGACAAAGCTGGTTCCAAGATGGGCGAGTACAAAGACTATGCTGCTCAGAAGGCAAAGGAAACTAAAGACGCAACGAAGGAAAAGGCTGGAGCGTACACGGACTCTACCGCTCAGAAAGCCAGGGAAACAAAGGACTGGACAATGGATAAGGCTGGTGAATATAAGGACTATGCCGCAGATAAGACCAGGCAAGCTAAGGACACGACCATGGAGAAGGCCGGGGAATATAAAGACTATGCAGCAGATAAGGCCAAGGATGCTAAGGATACTACTATGGATAAGGCAGGGGAATACAAGGACTACACTGCTGAGAAAGCAAGAGAAGGAAAGGATACTACAATGGGGAAGCTGGGGGAGCTGAAGGACTCAGCTGCTGATGCTGCTAAAAGGGCAATGGATTTCTTGACCGTAAAGAAAGAGGAAGCTAAAGAGAAGACTGCAGAAACGGCGGATGCCACCAAGAATAAGGCTTCTGAAACGGCAGAAGCAGCCAAGAATAAGGCTTCTGAGACGGCGGAGGCAGCCAAGCAGAAGTCTGGAGAGACGAAGGAGGCCACCAAGGAAAGGCTTAGCGGGGCAGAGGAAGAAGCAAGACTGAAAATGGATGAGCTAAAGATGGAAGATAGGGACTATGATGTGAAACAGACTCGAATGGCCCGTCAGCATGAAGGAGAAGCTGACCGAGGGAGTGCGGCAAAGAGTAATATTTTGGGGTCTTTTGGCGGCGTCGGCGAGGCCCTGAAATCAAAGCTTATTCAGCCATCGGAGGTGGTTGAGAAGACACGTGCTGCACGTGAGCATGGCGGTGTTGGGCGCACCGGTCTTGGTGGAGAGAAGGTAGAGGTGAATGTGGAAGAGACTCGCCCGGGAGCGGTGGCGGCCATATTTAAAGCGTCAGATCAGATGACAGGTCAGACCTTCAACGATCCTGGAAGCTTGGATGAGGAAGGCAAAATCCGTGTGATGCACCGCGAAAAAAAGGGAACGTG 1355 0.5092 MASSRQFKEERAEAAAKLAAEELKDANRELEREERNKLGITEQEQEQQQQQRPGVIGSMLRAVHDTYEHAKEAVVGKGHEGADTTRENIYVVEDKGGEVRDTAADKSRGAYDSTSDKVKETTDKAGSKMGEYKDYAAQKAKETKDATKEKAGAYTDSTAQKARETKDWTMDKAGEYKDYAADKTRQAKDTTMEKAGEYKDYAADKAKDAKDTTMDKAGEYKDYTAEKAREGKDTTMGKLGELKDSAADAAKRAMDFLTVKKEEAKEKTAETADATKNKASETAEAAKNKASETAEAAKQKSGETKEATKERLSGAEEEARLKMDELKMEDRDYDVKQTRMARQHEGEADRGSAAKSNILGSFGGVGEALKSKLIQPSEVVEKTRAAREHGGVGRTGLGGEKVEVNVEETRPGAVAAIFKASDQMTGQTFNDPGSLDEEGKIRVMHREKKGT 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02060 451 Pfam Late embryogenesis abundant protein 199 242 IPR004238 -
Bva13g02060 451 Pfam Late embryogenesis abundant protein 155 198 IPR004238 -
Bva13g02060 451 Pfam Late embryogenesis abundant protein 112 154 IPR004238 -
Bva13g02060 451 Coils Coil 305 329 - -
Bva13g02060 451 Coils Coil 269 300 - -
Bva13g02060 451 Coils Coil 247 267 - -
Bva13g02060 451 MobiDBLite consensus disorder prediction 24 58 - -
Bva13g02060 451 MobiDBLite consensus disorder prediction 138 163 - -
Bva13g02060 451 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 1 447 - -
Bva13g02060 451 MobiDBLite consensus disorder prediction 425 451 - -
Bva13g02060 451 Gene3D - 155 200 - -
Bva13g02060 451 Gene3D - 97 154 - -
Bva13g02060 451 Gene3D - 201 260 - -
Bva13g02060 451 MobiDBLite consensus disorder prediction 261 355 - -
Bva13g02060 451 MobiDBLite consensus disorder prediction 291 351 - -
Bva13g02060 451 MobiDBLite consensus disorder prediction 24 41 - -
Bva13g02060 451 MobiDBLite consensus disorder prediction 380 404 - -
Bva13g02060 451 MobiDBLite consensus disorder prediction 71 125 - -
Bva13g02060 451 Coils Coil 4 50 - -
Bva13g02060 451 PANTHER - 1 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02060 Bva-Chr13 16364627 16366283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02060 - - pvy:116110498 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02494 04 22632707 22634293 Bva13g02060 13 16364627 16366283 BWGD
Bva13g02060 13 16364627 16366283 Bva13g02060 13 16364627 16366283 ECH