Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02494 ATGGCGTCGTCAAGGCAATTCAAGGAAGAGCGAGCTGAAGCAGCAGCTAAGCTTGCTGCTGAAGACCTTAAAGACGTTAACAGAGAACGAGAGCACGAGGAAAGGTACAAGCTGGGGACGGAGCAGGAGCAGCACAGGTCCGGTGTTATAGGGTCCGTGTTAAGGGCAGTGCATGGTACTTACGAGCATGCCAAGGAAGCTGTGGTCGGAAAGGGTCATGAAGCTGCGGACATTACAAAGGAGGGCATCTATGGTGCCAAGGATAAAGCTGGGGAGATGGGAAACACAGCAGCCGACAAGTCTCTTGGAATTTATGATTCTGCCTCGGACAAGGCTAAGGAGTACAAGGATTACACAACAGACAAGACCAAGCTGACCAAGGATGCAACTAAGGAGAATGCCGACTATGCAGCTCAGAAGGCAAAGGACACCAAGGACGCAACGAAGGAAAAGGCTAGAGACTACAAAGACTCTGCTGCTCAGAAGGCCAAGGAGACCAAGGACGCTACAATGGAGAAGGCAGGTGAGTACAGAGATTATGCAGCAGATAAGGCCAAGGAAGCTAAGGACGCTACAATGCAGAAGGCAGGTGAGTATAGAGATTATGCAGCAGATAAGGCCAAGGAAGCTAAGGACGCTACAATGGAGAAGGCAGGGGAATACAAGGACTATGCTGCACAAAAGGCCAAGGATGCTAAGGATACTACTATGGAAACGGCAGGGGAGTACGAAGACTACACTGCCTCGAAAGCAAAAGAAGGGAAAGATACTACAATGGGGAAGCTGGGAGAGCTGAAGGACTCAGCTGCCGATGCTGCTAAAAGGGCTATGGGTTTCTTCACCggaaagaaagaggaagtTAAAGAGAAGGCGGCAGAGACGACGGAGGCCACCAAGCAGAAGTCTGCAGATACGGCGGAAGCAGCCATGAATAAGGCTTCTGCGGCGAAGGATGCCACCAAGGAAAAGCTTAGCCGATCAGAGGAAGAAGCAAGACGGAAAATGGAAGATCTTAAGATACAAGGCAGGGACCACGAAGAGGAACACGCTCGGAAGAACCATCAACGTAAGGAAGAAGGTGACAGAGGGAGTGCGGGGAAGAGTAATATTTTGGGATCGCTTGGCGGCTTGGGTGAGGCCCTGAAATCAAAGCTTACTCAGCCGTCGGCGGAGGTGGTTGAGAAGACACGCGAGCATGGCGGTGGAGATAAGATAGAGGTGAATGTGGAGGAGACTCGCCCGGGAACGGTGGCGGCGACGTTCAAAAAGTCAGATCAGATGAGCGGTCAGACCTTCAACGATCCTGGACGCGTGGATGAAGAGGGCATTATCCGTGTGGAACGCCGCGAAAAAATGTG 1358 0.511 MASSRQFKEERAEAAAKLAAEDLKDVNREREHEERYKLGTEQEQHRSGVIGSVLRAVHGTYEHAKEAVVGKGHEAADITKEGIYGAKDKAGEMGNTAADKSLGIYDSASDKAKEYKDYTTDKTKLTKDATKENADYAAQKAKDTKDATKEKARDYKDSAAQKAKETKDATMEKAGEYRDYAADKAKEAKDATMQKAGEYRDYAADKAKEAKDATMEKAGEYKDYAAQKAKDAKDTTMETAGEYEDYTASKAKEGKDTTMGKLGELKDSAADAAKRAMGFFTGKKEEVKEKAAETTEATKQKSADTAEAAMNKASAAKDATKEKLSRSEEEARRKMEDLKIQGRDHEEEHARKNHQRKEEGDRGSAGKSNILGSLGGLGEALKSKLTQPSAEVVEKTREHGGGDKIEVNVEETRPGTVAATFKKSDQMSGQTFNDPGRVDEEGIIRVERREKM 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02494 452 Coils Coil 303 348 - -
Bva04g02494 452 MobiDBLite consensus disorder prediction 23 46 - -
Bva04g02494 452 Coils Coil 9 29 - -
Bva04g02494 452 MobiDBLite consensus disorder prediction 391 410 - -
Bva04g02494 452 Coils Coil 138 158 - -
Bva04g02494 452 MobiDBLite consensus disorder prediction 419 433 - -
Bva04g02494 452 MobiDBLite consensus disorder prediction 281 297 - -
Bva04g02494 452 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 130 449 - -
Bva04g02494 452 PANTHER - 1 157 - -
Bva04g02494 452 PANTHER - 130 449 - -
Bva04g02494 452 MobiDBLite consensus disorder prediction 23 42 - -
Bva04g02494 452 Pfam Late embryogenesis abundant protein 134 177 IPR004238 -
Bva04g02494 452 Pfam Late embryogenesis abundant protein 179 218 IPR004238 -
Bva04g02494 452 Pfam Late embryogenesis abundant protein 201 243 IPR004238 -
Bva04g02494 452 Pfam Late embryogenesis abundant protein 244 276 IPR004238 -
Bva04g02494 452 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 1 157 - -
Bva04g02494 452 Gene3D - 224 281 - -
Bva04g02494 452 Gene3D - 131 179 - -
Bva04g02494 452 Gene3D - 180 223 - -
Bva04g02494 452 MobiDBLite consensus disorder prediction 281 443 - -
Bva04g02494 452 MobiDBLite consensus disorder prediction 122 178 - -
Bva04g02494 452 MobiDBLite consensus disorder prediction 316 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02494 Bva-Chr4 22632707 22634293 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02494 - - pvy:116110498 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02494 04 22632707 22634293 Bva13g02060 13 16364627 16366283 BWGD
Bva04g02494 04 22632707 22634293 Bva04g02494 04 22632707 22634293 ECH