Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02050 ATGCGGGGTTTTCTTCCATTGATCTTGGCTTTAGCCACCGTGCTAGTGTCGGTGTCGGTTGTATACAGTGGATTGCCGGGGAGTGTTCTCCAGCTTGAACGGGCTATTCCTCTAAGTCAGCGAGTGGAGCTGGAAGCACTGAGAGCTCGCGACCGGGTCAGACATGCTCGAATCTTGCAAGGAGTGGTGGGTGGAGTTGTCGACTTCTCAGTTGGAGGGAGCTCCGATCCTTCCTCCGCTGGGTACGGGCTGTATTTTACAAAAGTGAAGCTGGGCTCTCCACCAAGAGAATTTAACGTTCAGATCGATACTGGCAGTGATATCTTGTGGGTTAATTGCAATACTTGCGGTGATTGCCCTCAATCTAGTGGATTAGGGATTGATCTCAATTTCTATGATACAGCCAGCTCATCCACGGCTGCACTGATTTCCTGCTCAGATCCAGTATGCTCGTCTGCAGGTCAAAGTGTGGCAACTGAATGCTTGCCACAAAATAATCAGTGCGGCTACACCTTTCAGTATGGAGATGGAAGCGGGACATTAGGTTATTATGTATCTGATGCCATGTATTTTGACACGATCCTGGGACAGTCTGTGGCTAATTCTTCTTCTACCATTGTTTTCGGGTGTAGCACCTATCAATCTGGAGATTTGACCAAGACAGACAAAGCAGTTGATGGAATTTTTGGGTTTGGCCCTGGTGCTCTATCGGTTATATCACAATTGTCATCACGGAGTATAACACCCAAAGCGTTCTCTCATTGCTTAAGAGGAGAGGGAAATGGAGGAGGCATACTAGTTATGGGTGAGATTTTGGAGCCAAGTATGGTTTATAGTCCACTTGTCCCGTCACAGCCTCATTACAACTTATATCTGCAGAGCATTGCTGTCAATGGACAACTTCTGCCAGTTGATTCAGCTGTATTTGCAACATCAAACAACCGGGGAACTATAGTTGATTCTGGTACAACGTTGGCATACCTTGTGCAAGAAGCTTATGATCCATTAGTCAACGCTATAACTACCATCGTATCAAAATCTGCCAGTCCAATTATTTCCAGAGGAACTCAATGTTATCTGGTCTCATTCAGTGTTGTTGATATATTTCCTCAAGTTAGTTTAAACTTTGCGGGTGGAGCATCTATGGTTTTAAAACCAGAACAGTACCTTATGCCTTCAGGCTTCCATGATGGTTCTCCGATGTGGTGTATAGGTTTCCAGAAGGTGCAGGAAGGAGTCTCAATTTTAGGAGATCTTGTCTTGAAAGATAAGATTTTTGTCTATGACTTGGCTCATCAGCGAATTGGATGGGCTAACTATGATTGTTCCCTGGCTGTAAATGTCTCTGTGACTACAAGCAAGGATGAGTACATCAATCCAGGACAGTTTAGTGTGAGCAGCTCACAGGTGGACATTCCCACCAAGTTGCTACCTCTGAGCATTGTGGTTTTATTTATGCACATAATAGTTATCATCGAGTGCCAGTTTTGGTA 1493 0.4494 MRGFLPLILALATVLVSVSVVYSGLPGSVLQLERAIPLSQRVELEALRARDRVRHARILQGVVGGVVDFSVGGSSDPSSAGYGLYFTKVKLGSPPREFNVQIDTGSDILWVNCNTCGDCPQSSGLGIDLNFYDTASSSTAALISCSDPVCSSAGQSVATECLPQNNQCGYTFQYGDGSGTLGYYVSDAMYFDTILGQSVANSSSTIVFGCSTYQSGDLTKTDKAVDGIFGFGPGALSVISQLSSRSITPKAFSHCLRGEGNGGGILVMGEILEPSMVYSPLVPSQPHYNLYLQSIAVNGQLLPVDSAVFATSNNRGTIVDSGTTLAYLVQEAYDPLVNAITTIVSKSASPIISRGTQCYLVSFSVVDIFPQVSLNFAGGASMVLKPEQYLMPSGFHDGSPMWCIGFQKVQEGVSILGDLVLKDKIFVYDLAHQRIGWANYDCSLAVNVSVTTSKDEYINPGQFSVSSSQVDIPTKLLPLSIVVLFMHIIVIIECQFW 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02050 497 CDD pepsin_A_like_plant 85 442 IPR034161 -
Bva13g02050 497 Pfam Xylanase inhibitor C-terminal 287 438 IPR032799 -
Bva13g02050 497 Gene3D Acid Proteases 271 449 IPR021109 -
Bva13g02050 497 ProSiteProfiles Peptidase family A1 domain profile. 85 438 IPR033121 -
Bva13g02050 497 PRINTS Pepsin (A1) aspartic protease family signature 317 328 IPR001461 GO:0004190|GO:0006508
Bva13g02050 497 PRINTS Pepsin (A1) aspartic protease family signature 414 429 IPR001461 GO:0004190|GO:0006508
Bva13g02050 497 PRINTS Pepsin (A1) aspartic protease family signature 91 111 IPR001461 GO:0004190|GO:0006508
Bva13g02050 497 Gene3D Acid Proteases 74 270 IPR021109 -
Bva13g02050 497 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 5 460 - -
Bva13g02050 497 Pfam Xylanase inhibitor N-terminal 85 269 IPR032861 -
Bva13g02050 497 SUPERFAMILY Acid proteases 81 444 IPR021109 -
Bva13g02050 497 PANTHER ASPARTYL PROTEASES 5 460 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02050 Bva-Chr13 16296728 16301726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02050 83 443 Miscellaneous Gene Families AT1G44130 26.893 2.23e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02050 - - gmx:100804147 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02500 04 22657473 22661673 Bva13g02050 13 16296728 16301726 BWGD
Bva13g02050 13 16296728 16301726 Bva13g02050 13 16296728 16301726 ECH