Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02045 ATGAGTTTTGTGATTAGAAATTACTTAGCAATAGCATTACCCGTTAGTCAGAGAAACGTGCAGGTGCGACGCGTACCGGAATATTTCAGACATCTTCGTCGTCCTCCTTTCTCTCTGAAGATTACTCCTGaaaattttagggtttcttttctttcttggatTAGTGATTCAGGAATTCTGGATCACCTACCGATGTTCAAATTCTGGGGATCACAAGAGCAACAGTCTCAGTCACGTCCACAGGATGGTTCTTCACCATCCTGGTATCCTCCATCTGTCCTGAGCTCGCCAAGTACTTCTAGGCCTGCAACACCTAGTGGCACTTCCTTAAGCAGCTATAGTTCACCAAGGCCTACAGAGAGGTTGCAGCCTCCTTCGTATGTTTCACCTGCTGAAGCTGCAGGAGTTATTGCAGCtttaaaagacaaaagCGTTGATGAATTTCGTAAGCTTTCATCAGACAAAGAGGCATTCCGGCAGTTTTTACATTCTCTTGAACaagtcaaaattcaaaacaatCTGAGAGACGAACTTCGTGAGGAGACATTGCAGCTTTCCAGGGGGAATCTGGAGAAGGAACCTCGTATCATGGAACTAAGGAATCAGTGTAGAATAATTCGGACAACCGAGTTAGCTGCGGCTCTAGAGAAACTAAATGAGCTTGAGAAACAGAGATATGAAACATTGAAGTCCAATTCTCCAGCAGCCCTTCTCCAGCGGGTTCAAgAATCGATGAATAAGACGGATGAGGaatctgaaaattttcacCAGCAACTCCTCGATAGAGAGCTTGACCTTGGGACATTTGTGCAGAAATACAAGATGCTCCGTACCACTTACCACAGGGGAGCTCTCATACATATTGCAGCTAAAACAACTACATA 884 0.4163 MSFVIRNYLAIALPVSQRNVQVRRVPEYFRHLRRPPFSLKITPENFRVSFLSWISDSGILDHLPMFKFWGSQEQQSQSRPQDGSSPSWYPPSVLSSPSTSRPATPSGTSLSSYSSPRPTERLQPPSYVSPAEAAGVIAALKDKSVDEFRKLSSDKEAFRQFLHSLEQVKIQNNLRDELREETLQLSRGNLEKEPRIMELRNQCRIIRTTELAAALEKLNELEKQRYETLKSNSPAALLQRVQESMNKTDEESENFHQQLLDRELDLGTFVQKYKMLRTTYHRGALIHIAAKTTT 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02045 294 Coils Coil 238 258 - -
Bva13g02045 294 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 67 293 - -
Bva13g02045 294 Coils Coil 212 232 - -
Bva13g02045 294 MobiDBLite consensus disorder prediction 71 126 - -
Bva13g02045 294 Pfam Modifier of rudimentary (Mod(r)) protein 141 282 IPR009851 -
Bva13g02045 294 ProSiteProfiles VPS37 C-terminal domain profile. 215 294 IPR009851 -
Bva13g02045 294 MobiDBLite consensus disorder prediction 71 122 - -
Bva13g02045 294 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37A 67 293 - -
Bva13g02045 294 SUPERFAMILY Endosomal sorting complex assembly domain 233 281 IPR037202 -
Bva13g02045 294 Gene3D Helix hairpin bin 216 285 IPR029012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02045 Bva-Chr13 16281478 16284579 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02045 K12185 - qlo:115952267 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02503 04 22668332 22671806 Bva13g02045 13 16281478 16284579 BWGD
Bva13g02045 13 16281478 16284579 Bva13g02045 13 16281478 16284579 ECH