Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02503 ATGTTCAGATTCTGGGGATCACAAGAACAACAGTCTCAGCCTCGTCCACAGGATGGTTCTTCACAATCTTGGTATCCTCcatctgtccttagctccccTGGTTCTTCTAGGCCTGCAACACCCGCTGGCACTTCCTCAAGTAGCTATAGTACACAGAGGCCTACAGAGAGGGTGCAGCCTCCTTCGCATGTTTCCCCTGCTGAAGCTGCTGGGGTTATTGCTGCTCTGAAAGACAAAAGTGTCGATGAATTGCGGAAGCTTTTATCAGACAAAGAGGCATTCCGGCAGTTTTTACATTCACTTGATCAggtcaaaattcaaaacaatCTTAGAGACGAACTTCGTGAGGAGACTTTGCAGCTTGCCAGGGCAAATCTGGAGAAGGAACCTCGTATCATGGAACTTAGGAATCAGTGTAGAATAATTCGTACAACCGAATTAGCTGCTGCTCAAGAGAAACTAAATGAGCTTGAGAAGCAGGGAGACGAAGCGTTGAAGTCCAATTCTCCAGCATCCCTTCTCCAAAGGGTTCAAGAGGCGATGAATAAGACAGACGAGGaatctgaaaattttcatcagCAACTCCTTGATAGAGAGATTGACATCGGGGCTTTTGTGCAGAAATACAAGAAACTCCGTAACACTTACCACAGAAGAGCTCTCATACATCTAGCAGCTAAAACATCAACCGTATA 695 0.4259 MFRFWGSQEQQSQPRPQDGSSQSWYPPSVLSSPGSSRPATPAGTSSSSYSTQRPTERVQPPSHVSPAEAAGVIAALKDKSVDELRKLLSDKEAFRQFLHSLDQVKIQNNLRDELREETLQLARANLEKEPRIMELRNQCRIIRTTELAAAQEKLNELEKQGDEALKSNSPASLLQRVQEAMNKTDEESENFHQQLLDREIDIGAFVQKYKKLRNTYHRRALIHLAAKTSTV 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02503 231 SUPERFAMILY Endosomal sorting complex assembly domain 169 219 IPR037202 -
Bva04g02503 231 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 3 230 - -
Bva04g02503 231 Coils Coil 174 194 - -
Bva04g02503 231 Pfam Modifier of rudimentary (Mod(r)) protein 77 221 IPR009851 -
Bva04g02503 231 MobiDBLite consensus disorder prediction 1 59 - -
Bva04g02503 231 ProSiteProfiles VPS37 C-terminal domain profile. 151 231 IPR009851 -
Bva04g02503 231 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37A 3 230 - -
Bva04g02503 231 Coils Coil 140 167 - -
Bva04g02503 231 MobiDBLite consensus disorder prediction 1 65 - -
Bva04g02503 231 Gene3D Helix hairpin bin 156 224 IPR029012 -
Bva04g02503 231 Coils Coil 107 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02503 Bva-Chr4 22668332 22671806 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02503 K12185 - qlo:115952267 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02503 04 22668332 22671806 Bva13g02045 13 16281478 16284579 BWGD
Bva04g02503 04 22668332 22671806 Bva04g02503 04 22668332 22671806 ECH