Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02042 atgTCTCCTGCAATGGCAACGACAAAGGAAAGGAGAGACGAGGAAAGCCCATACCAGAAAGGTGTGAAGCAGCTTTGTGAAAATGGCCTCCAAAGAGTACCTAACAAGTACATATTGCCTTCTTCGGAACGGCCAAACAGGAACGTGGAGGATTTCAATGTTGCCAAGGAAAATCTCCAGCTGCCTATCATTGATTTTGCTGATTTGATTGGTCCAAACAGGCCCCAAGCCCTTAAATCCCTTGCTAATGCTTGTGAGACGTACGGTTTTTTTCAGTTGGTGAGTCATGGCATTCCCGACGACGTCCTTAGAGACATGATGGATGTAAGTGGTAGATTCTTTGATCTTCCTTTCGAGGAAAGAGCCAAGTACATGACCACAGACATGCGAGCACCCGTCCGATATGGGACCAGCTTCAGCCAAACCAGAGACAGTGTGTTTTGCTGGAGGGACTTCTTGAAATTGCTCTGCCATCCCGTACCAGATTTTCTCCCTCTATGGCCAGTTTTGCCCGTGGACTTCCGgAAACTGGCGGCTACCTACGCAGAAGAGAACAAAAACTTGTTCGTAACTCTAATCGAAGCCATTCTAGAGAGCTTAGGAATAATGGAGGACAAAGAGAAGCAGACAGAAGAGAAGGATCTGTTGAAAGGGTTCCAAGATGGGAGCCAGCTAATGGTGGTAAACTGCTACCCACCATGCCCTGAACCAGAACTAACCCTAGGAATGCCCCCTCACTCTGATTATGGCTTCCTTACTCTTCTCCTGCAAGACAAGGTTGAGGGTTTGCAGATCCAATTTCAGGGAAAATGGGTCACCGTTGACCCCATTGCCAACGCCTTTGTCGTCAACATTGGTGATCACTTGGAGATCTTTAGCAATGGGAGGTACAAGAGCGTACTGCATAGGGTTTTGGTGAATGCTGAGAAGAGTAGAATAACGGTGGCTTCACTCCAGAGTCTTGCTTTCAACTGTTCCGTGAGACCATCCCCAAAGCTCATTGACGAAAAGAATCCCAAGCGTTACAAAGACACAGACTTTGGTACTTTTCTTGATTACGTTACAAAACAAGAGCCCAAGGGAAAAAGTTTTCTGGAGTCTAGGAAATTGACTTGTTA 1118 0.4642 MSPAMATTKERRDEESPYQKGVKQLCENGLQRVPNKYILPSSERPNRNVEDFNVAKENLQLPIIDFADLIGPNRPQALKSLANACETYGFFQLVSHGIPDDVLRDMMDVSGRFFDLPFEERAKYMTTDMRAPVRYGTSFSQTRDSVFCWRDFLKLLCHPVPDFLPLWPVLPVDFRKLAATYAEENKNLFVTLIEAILESLGIMEDKEKQTEEKDLLKGFQDGSQLMVVNCYPPCPEPELTLGMPPHSDYGFLTLLLQDKVEGLQIQFQGKWVTVDPIANAFVVNIGDHLEIFSNGRYKSVLHRVLVNAEKSRITVASLQSLAFNCSVRPSPKLIDEKNPKRYKDTDFGTFLDYVTKQEPKGKSFLESRKLTC 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02042 372 Gene3D - 14 353 IPR027443 -
Bva13g02042 372 Pfam 2OG-Fe(II) oxygenase superfamily 225 317 IPR044861 -
Bva13g02042 372 SUPERFAMILY Clavaminate synthase-like 20 358 - -
Bva13g02042 372 MobiDBLite consensus disorder prediction 1 21 - -
Bva13g02042 372 PRINTS Isopenicillin N synthase signature 246 267 - -
Bva13g02042 372 PRINTS Isopenicillin N synthase signature 281 307 - -
Bva13g02042 372 PRINTS Isopenicillin N synthase signature 81 98 - -
Bva13g02042 372 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 221 321 IPR005123 -
Bva13g02042 372 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 13 370 - -
Bva13g02042 372 Pfam non-haem dioxygenase in morphine synthesis N-terminal 61 159 IPR026992 -
Bva13g02042 372 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 13 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02042 Bva-Chr13 16263467 16265059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02042 19 370 Glycosyltransferase AT5G59530 34.153 4.58e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02042 - - gmx:100805175 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02506 04 22685889 22689384 Bva13g02042 13 16263467 16265059 BWGD