Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02506 ATGGATAGATTTTCTCTTCTCACCGACTCCAATTCATTTTCCTTGGCCAAGATTGTTCATATAGattctatacatatatatatgtctccTTCAATGATGATAACCGACGATGAAAGCCGATACCAGAAAGGAGTGAAGCATCTTTGTGAAAATGGCCTCCAAGAAGTACCTAATAAGTACATATTGCCTTCTTCGGAACGGCCAAATAGGAACATGGAGGATTTTAATGTTGTCAAGGAAAACCTCCAGCTGCCCATCATTGATTTTGCTGATTTGATCGGTCCAGACAGGCCCCGAGCCCTTAAATCCCTTGCCAATGCCTGTGAAACATACGGTTTCTTTCAGTTGGCGAATCATAGCATTCCCGGCGACGTCGTTAGGAACATGATGGATGTAGGTGGTAGATTCTTTGATCTTCCTTTTGAGGAAAGAGCAAAGTACATGGCCACGGATATGCGAGCACCAGTCCGATATGGGACCAGCTTCAGCCAAACCAAGGACAGTGTGTTCTGCTGGAGGGACTTCTTGAAATTGCTGTGCCATCCCTTACCAGATTTTCTCCCACAATGGCCTGTTTTACCCGTGGACTTCCGGAAAGTGGCAGCTACCTACGCAGAAGAGACCAAAAGCTTGTTCGTGACGTTAATGGAAGCTGTTCTAGACAGCTTAGGAATAATGGAAGACAAGCAGAAACAAACAGAAGAAACGGATATGCTAAAAGAGTTCCAAGATGGAAGCCATCTAATGGTGGTAAATTACTACCCGGCATGCCCAGAACCAGAACTAACCCTAGGGATGCACCCTCACTCCGATTATGGCTTCCTCACACTTCTCCTACAAGACGAGGTTGAGGGTTTGCAGATCCAATTTCAAGGGAAGTGGGTCACCGTTGACCCTATACCCAACGCATTTGTCGTCAACGTTGGTGATCACTTGGAGATATTCAGCAATGGGAGGTACAAGAGCGTACTTCATAGGGTTTTGGTGAATGCTACGAAGAGTAGGATATCGGTGGCTTCACTCCAGAGTGTTGGTTTCAACTGCAGGGTGAGACCGTCACCAAAGCTCATTGACGAAAAGAATCCCAAGCGTTACAAAGATACAGACTTTGGCACATTCCTTGATTACATTACAAAACACGTGCCCAAGAGTAAAGATTTCCTAGATTCCAGGAAATTGACTTATTA 1187 0.444 MDRFSLLTDSNSFSLAKIVHIDSIHIYMSPSMMITDDESRYQKGVKHLCENGLQEVPNKYILPSSERPNRNMEDFNVVKENLQLPIIDFADLIGPDRPRALKSLANACETYGFFQLANHSIPGDVVRNMMDVGGRFFDLPFEERAKYMATDMRAPVRYGTSFSQTKDSVFCWRDFLKLLCHPLPDFLPQWPVLPVDFRKVAATYAEETKSLFVTLMEAVLDSLGIMEDKQKQTEETDMLKEFQDGSHLMVVNYYPACPEPELTLGMHPHSDYGFLTLLLQDEVEGLQIQFQGKWVTVDPIPNAFVVNVGDHLEIFSNGRYKSVLHRVLVNATKSRISVASLQSVGFNCRVRPSPKLIDEKNPKRYKDTDFGTFLDYITKHVPKSKDFLDSRKLTY 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02506 395 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 35 393 - -
Bva04g02506 395 SUPERFAMILY Clavaminate synthase-like 43 381 - -
Bva04g02506 395 Gene3D - 34 376 IPR027443 -
Bva04g02506 395 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 35 393 - -
Bva04g02506 395 Pfam 2OG-Fe(II) oxygenase superfamily 247 340 IPR044861 -
Bva04g02506 395 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 245 352 IPR005123 -
Bva04g02506 395 PRINTS Isopenicillin N synthase signature 304 330 - -
Bva04g02506 395 PRINTS Isopenicillin N synthase signature 104 121 - -
Bva04g02506 395 PRINTS Isopenicillin N synthase signature 269 290 - -
Bva04g02506 395 Pfam non-haem dioxygenase in morphine synthesis N-terminal 84 182 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02506 Bva-Chr4 22685889 22689384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02506 42 368 Glycosyltransferase AT5G59530 35.821 3.18e-55 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02506 - - gmx:100805175 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02506 04 22685889 22689384 Bva13g02042 13 16263467 16265059 BWGD