Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02022 atgagtTCATCTTCGGGTCAGAGTAGTGGCTATGATCTCTCTTTCAAGATCTTGTTGATCGGCGATTCCGGTGTAGGAAAGAGTAGTCTGCTTGTCAGCTTCATTTCCAGCACTGTTGAAGATCTTGCCCCAACAATTGGTGTTGATTTTAAGATCAAGTTGCTCACCGTAGGTGGGAAGAGATTAAAACTAACAATCTGGGACACTGCTGGGCAGGAAAGATTCAGAACCTTAACAAGTTCTTATTACAGAGGAGCGCAAGGAATTATTCTAGTTTATGATGTCACAAGGAGGGAGACGTTTACAAACTTATCAGAAGTATGGTCTAAAGAAGTGGAACTCTATTCAACCAATCAGGATTGCGTGAAGATACTAGTTGGAAACAAAGTTGATAAAGAATCAGAAAGGGCTGTGAGTAGAGAAGAGGGTGCTGCTCTCGCCAAAGAGATGGGCTCTCTGTTTCTTGAATGTAGTGCTAAAACTCGAGAAAATGTGGAGCAATGCTTTGAGGAACTTGCTATGAAGATAATGGATATTCCTAGTCTTCTGGAAGAAGGATCAACCGTAGTAAAAAGGAACATATTGAAGCAGAAACAGGAACCCCAAGCACAAGAAAGAGGTGGCTGTTGCTCTTG 635 0.4173 MSSSSGQSSGYDLSFKILLIGDSGVGKSSLLVSFISSTVEDLAPTIGVDFKIKLLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVKILVGNKVDKESERAVSREEGAALAKEMGSLFLECSAKTRENVEQCFEELAMKIMDIPSLLEEGSTVVKRNILKQKQEPQAQERGGCCS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02022 211 ProSiteProfiles small GTPase Rab1 family profile. 10 211 - -
Bva13g02022 211 PANTHER DRAB5-RELATED 1 211 - -
Bva13g02022 211 SMART ran_sub_2 20 211 - -
Bva13g02022 211 ProSiteProfiles small GTPase Ras family profile. 6 211 IPR001806 GO:0003924|GO:0005525
Bva13g02022 211 CDD Rab18 15 176 - -
Bva13g02022 211 PRINTS Transforming protein P21 ras signature 119 132 - -
Bva13g02022 211 PRINTS Transforming protein P21 ras signature 37 53 - -
Bva13g02022 211 PRINTS Transforming protein P21 ras signature 55 77 - -
Bva13g02022 211 PRINTS Transforming protein P21 ras signature 154 176 - -
Bva13g02022 211 PRINTS Transforming protein P21 ras signature 15 36 - -
Bva13g02022 211 Pfam Ras family 16 177 IPR001806 GO:0003924|GO:0005525
Bva13g02022 211 Gene3D - 8 210 IPR027417 -
Bva13g02022 211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 199 IPR027417 -
Bva13g02022 211 TIGRFAM small_GTP: small GTP-binding protein domain 15 171 IPR005225 GO:0005525
Bva13g02022 211 ProSiteProfiles small GTPase Arf family profile. 8 176 - -
Bva13g02022 211 PANTHER SMALL MONOMERIC GTPASE-RELATED 1 211 - -
Bva13g02022 211 SMART rho_sub_3 17 179 IPR001806 GO:0003924|GO:0005525
Bva13g02022 211 ProSiteProfiles small GTPase Rho family profile. 8 177 - -
Bva13g02022 211 SMART rab_sub_5 15 179 - -
Bva13g02022 211 SMART ras_sub_4 12 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02022 Bva-Chr13 16140015 16142517 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02022 9 112 EF-hand Containing Proteins AT5G27540 29.808 2.07e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02022 K07910 - gmx:100799887 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00156 04 974773 978302 Bva13g02022 13 16140015 16142517 BWGD
Bva13g02022 13 16140015 16142517 Bva13g02022 13 16140015 16142517 ECH