Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00156 atgggTTCTGCTTCAAGAGTTGTGAATAGCAGTTATGATTACTCATTCAAGATTTTGTTGATTGGTGATTCCGGTGTAGGCAAGAGCAGTCTTCTTCTCAGCTTCATCTCTAATTCTGTTCACGATCTCTCCCCCACAATTGGCGTGGACTTTAAGATCAAACTCCTTACAGTTGGTGgtaaaagattaaaacttaCTATTTGGGACACAGCTGGACAGGAGAGGTTTGGAACAGTGATAAGCTCTTACTACAGAGGTGCACATGGAATCATGCTCGtCTATGACGTGACAAGGCGCGAAACCTTTACAAACTTGGTGAATATATGGGCAAAAGAAGTTGAGCTCTACTCCACCAATCATGAGTGCATCAAAATTCTAGTTGGGAATAAGGTAGATAAGGATAGCGAAAGAGCAGTAACCAAGGAAGAGGGTATGGCTCTTGCACAGAAGCATAAATGCTTGTTTCTAGAGTGTAGTGCCAAAACCAGAGAAAATGTTCAGCAATGCTTTAATGATCTTACCTTAAAGATATTGGAGGTACCGAGCTTACGCGAAAAGGGATCTGGGGTGGTAAAGAGACACAATTTGAGGCAAAAACATGTGTATGGGACACCTCAAAATGGTTGCTGTTCTGAGTA 638 0.4091 MGSASRVVNSSYDYSFKILLIGDSGVGKSSLLLSFISNSVHDLSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQERFGTVISSYYRGAHGIMLVYDVTRRETFTNLVNIWAKEVELYSTNHECIKILVGNKVDKDSERAVTKEEGMALAQKHKCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGSGVVKRHNLRQKHVYGTPQNGCCSE 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00156 212 SMART ran_sub_2 21 209 - -
Bva04g00156 212 Pfam Ras family 17 178 IPR001806 GO:0003924|GO:0005525
Bva04g00156 212 PANTHER SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 4 211 - -
Bva04g00156 212 SMART rab_sub_5 16 180 - -
Bva04g00156 212 CDD Rab18 16 177 - -
Bva04g00156 212 SMART rho_sub_3 18 180 IPR001806 GO:0003924|GO:0005525
Bva04g00156 212 Gene3D - 8 210 IPR027417 -
Bva04g00156 212 ProSiteProfiles small GTPase Ras family profile. 3 212 IPR001806 GO:0003924|GO:0005525
Bva04g00156 212 TIGRFAM small_GTP: small GTP-binding protein domain 14 171 IPR005225 GO:0005525
Bva04g00156 212 PANTHER DRAB5-RELATED 4 211 - -
Bva04g00156 212 ProSiteProfiles small GTPase Rho family profile. 9 178 - -
Bva04g00156 212 PRINTS Transforming protein P21 ras signature 120 133 - -
Bva04g00156 212 PRINTS Transforming protein P21 ras signature 38 54 - -
Bva04g00156 212 PRINTS Transforming protein P21 ras signature 16 37 - -
Bva04g00156 212 PRINTS Transforming protein P21 ras signature 155 177 - -
Bva04g00156 212 PRINTS Transforming protein P21 ras signature 56 78 - -
Bva04g00156 212 SMART ras_sub_4 13 180 - -
Bva04g00156 212 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 200 IPR027417 -
Bva04g00156 212 ProSiteProfiles small GTPase Rab1 family profile. 11 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00156 Bva-Chr4 974773 978302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00156 15 170 EF-hand Containing Proteins AT5G27540 27.329 1.13e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00156 K07910 - gmx:100500172 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00156 04 974773 978302 Bva13g02022 13 16140015 16142517 BWGD