Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02010 ATgtttaagaaaatcataaaggGTGGCAACAAAAAGTCCTCCAAGTCCGACCCCAACGATCCATCGCAATATGGGTACGGGGCTGCGGGGAACCGAAACTCTGCTCCGGTCTCCACCAATGTGGTGGTCAACCATGCCTCTCGGGGTGGCCTTGGTGCATCGGGCCCGAATGTTGGTGCAGGTATGGCTGTAGCTCCGCCTTCTGCTGCCGTGGAGCCCCTCCCCTTGTTACGGGATGCGCCCGTTTCGGAGAGACCGAACTTGTTCCTTCGCAAGTTGCAGATTTGTTGTTACGTTTTTGATTTCTCGGACACCTTGAAGTCTGTTCgagaaaaggaaatcaaaCGGCAGACACTTATGGAATTGGTTGACTTCATACAATCCGGGTCGGGTAAAATCACGGAGAATTGTCAGGAAGAGATGATAAGAATGATATCAGTAAATATATTCCGGTCCTTACCTCCGGCTGCGCATGAAAATACTGGGCAAGAGGTTACCGATCCTGAAGAAGAGGAACCTTCCTTGGATCCAGCATGGCCCCATTTGCAGCTTGTGTATGAACTGCTTCTGAGATATGTGGTGTCTTCCGATACTGATACCAAGGTTGCCAAACGGTATATTGTTCATTCTTTTGTGTTGAAATTGCTTGATTTATTTGACTCCGAGGACCCTCGAGAGCGAGAATATTTGAAAACCATCCTACATCGCATATATGGAAAGTTCATGGTTCACCGGCCATTCATTAGGAAGGcaattaataacattttttatcgGTTTATTTATGAGACTGAGAGGCACAGTGGTATTGGCGAGCTTCTGGAGATCCTTGGGAGCATCGTCAACGGTTTTGCACTGCCAATGAAAGAGGAGCACAAGTTGTTTCTTGTCCGGGCGCTCATACCTCTGCATAAACCTAAGCCAATTTCCTTGTATCACCAGCAGTTGTCATACTGCATTACTCAGTTTGTTGAAAAGGATTACAAGCTAGCGGATACAGTTATTAGGGGTTTGTTAAAGTACTGGCCTGTGATCAATTGTCAGAAGGAAGTTCTCTTCATTGGAGAACTGGAGGAAATACTAGAGGCGACACAACCTTCAGAATTCCAACGCTGCATGGTTCCCCTTTTTAGACAGATTGCCCGCTGCCTCAATAGTTATCACTTCCAGGTTGCAGAACGGGCCCTCTTTTTGTGGAATAATGAGCATATTGTGAGCCTAATTGCCCAAAACAGGAGTGTGGTATTACCAATAATATTTGGAGCATTAGAGAAGAATGTCCGGAGTCATTGGAACCAGGCAGTTCATGGGCTTACTGTCAATGTTCGGAAGATGTTTGTGGAAATGGATACTGAACTGTTTGAAGAGTGCCAGAGGCAATATGCAGAGAAAGAGGCTAAAGCCAAAGAGGTGGAAGAGCAGCGGCAATTGAATTGGGAGAGACTGGCAGATGCTGCTGGCGAGGATATGGTTACAATTTA 1478 0.4513 MFKKIIKGGNKKSSKSDPNDPSQYGYGAAGNRNSAPVSTNVVVNHASRGGLGASGPNVGAGMAVAPPSAAVEPLPLLRDAPVSERPNLFLRKLQICCYVFDFSDTLKSVREKEIKRQTLMELVDFIQSGSGKITENCQEEMIRMISVNIFRSLPPAAHENTGQEVTDPEEEEPSLDPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIVHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIVNGFALPMKEEHKLFLVRALIPLHKPKPISLYHQQLSYCITQFVEKDYKLADTVIRGLLKYWPVINCQKEVLFIGELEEILEATQPSEFQRCMVPLFRQIARCLNSYHFQVAERALFLWNNEHIVSLIAQNRSVVLPIIFGALEKNVRSHWNQAVHGLTVNVRKMFVEMDTELFEECQRQYAEKEAKAKEVEEQRQLNWERLADAAGEDMVTI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02010 492 Coils Coil 453 473 - -
Bva13g02010 492 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 74 485 IPR002554 GO:0000159|GO:0007165|GO:0019888
Bva13g02010 492 Gene3D - 81 484 IPR011989 -
Bva13g02010 492 SUPERFAMILY ARM repeat 86 468 IPR016024 -
Bva13g02010 492 PIRSF PP2A_B56 32 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Bva13g02010 492 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 492 - -
Bva13g02010 492 MobiDBLite consensus disorder prediction 1 32 - -
Bva13g02010 492 MobiDBLite consensus disorder prediction 15 32 - -
Bva13g02010 492 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 492 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02010 Bva-Chr13 16092182 16096442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02010 K11584 - jre:109011996 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00165 04 1033622 1036645 Bva13g02010 13 16092182 16096442 BWGD
Bva13g02010 13 16092182 16096442 Bva13g02010 13 16092182 16096442 ECH