Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00165 ATGTTCAATAAGATCATAAAGCGTTCGCACAGGAAATCTGCGAAATCGGAATTTAGTGAAATTTCTGCAGATAGGCATCGACCAGCGGAAGTCATTGTTAACCATGCATCTCGTACTGCCACCAATCCATCAACCCCCAAGTCGGACGCACATAACATCTCATCTCCGGCGGCGGCACCACTTCCCATTTCTGGGGTTATTGAAATGCTTCCACCACTACGAGAAGTTGCTGTTCCAGAACAGCCTAATTTATTCCTGCGGAAGATTAAAATGTGTTGCGTTCTATGTGATTTTTCAAGCACTTTGAAAATGATTcgggaaaaggaaattaaacgCCAAGCACTTTATGAAATAGTTGACATCATACAATCTGGATGGTTCAAATTCAGCGAACTTATGCAAGAAGAGCTGATTCGGATGGTTTCAGTTAATATTTTTCGATGTTTGCCCCCTGCATCCCATGAAAGTAGAGGGACTGGAAGTGCAGATCCTGAAGAGGATGACACATATTTGGATCCATCATGGCCTCATTTACAGATTGTGTATGAAATTCTGTTGAGGTACATTGTGTCATCTGAGACAGATACAAGGGTTGCAAAGCGCTATGTTGatcatatatttgttttgaaactGATTGATTTGTTTGATTCGGAGGACCCACGAGAGCGTGAGTATTTGAAGGCCATTCTTCACCGTATATATGGGAAGTTCATGGTGCACAGGCCCTTCATAAGAAAggcaataaataatatattttatcggTTTATATTTGAGACAGAGAGATATAATGGTATAGCTGAGCTATTGGAGATTCTAGGTAGTATTATAAATGGGTTTGCATTGCCAATGAAAGAGGAGCATAAATTGTTTCTTGTCCGGGCACTTGTACCGCTTCACAAGACAAAATCAATTGCCACTTATCACCAACAACTGTCTTACTGCATTACTCAGTTTGTTGAGAAGGACTACAGGTTGGCAGATCCTGTGATCAAAGGGTTGTTGAAGTACTGGCCAGTTGTAAATTGCCAGAAGGaggttctttttcttggtgaaCTTGAAGAGGTTCTGGAAGCTACTATGTCTGCAGAATTTCAAAGTTGCATGGTCCCTCTTTTCAGGCAGATTGGACGCTGCCTTAACAGCCCTAACTTCCAGGTTGCTGAACGTGCACTTTACTTGTGGAACAATGAGCACATTGTAAATTTAATAGCTCAGAATCGGAAGGTAATATTACCAGTAATCATTGAAGCATTGGAGAAGAATATGAAAGGGCATTGGAACCAAGCAGTGCATGGGCTGACTGCCAATGTTTGGAAGATGTTTATGGAGATGGACGGCGAACTGTTTGAAGAATGCCATATGCGGTGCTTAGAGAAGGCAGCCAGGGCTGCAGAATTGGAAGAGCAGCGGGAGTTAACATGGAAGAAGCTGGAAGCAGTGGCTGCACAAGCGGTGAGGGATGGTATGgttttggttaatta 1481 0.4038 MFNKIIKRSHRKSAKSEFSEISADRHRPAEVIVNHASRTATNPSTPKSDAHNISSPAAAPLPISGVIEMLPPLREVAVPEQPNLFLRKIKMCCVLCDFSSTLKMIREKEIKRQALYEIVDIIQSGWFKFSELMQEELIRMVSVNIFRCLPPASHESRGTGSADPEEDDTYLDPSWPHLQIVYEILLRYIVSSETDTRVAKRYVDHIFVLKLIDLFDSEDPREREYLKAILHRIYGKFMVHRPFIRKAINNIFYRFIFETERYNGIAELLEILGSIINGFALPMKEEHKLFLVRALVPLHKTKSIATYHQQLSYCITQFVEKDYRLADPVIKGLLKYWPVVNCQKEVLFLGELEEVLEATMSAEFQSCMVPLFRQIGRCLNSPNFQVAERALYLWNNEHIVNLIAQNRKVILPVIIEALEKNMKGHWNQAVHGLTANVWKMFMEMDGELFEECHMRCLEKAARAAELEEQRELTWKKLEAVAAQAVRDGMVLVN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00165 493 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 70 481 IPR002554 GO:0000159|GO:0007165|GO:0019888
Bva04g00165 493 Gene3D - 78 480 IPR011989 -
Bva04g00165 493 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 493 IPR002554 GO:0000159|GO:0007165|GO:0019888
Bva04g00165 493 SUPERFAMILY ARM repeat 82 462 IPR016024 -
Bva04g00165 493 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 493 - -
Bva04g00165 493 PIRSF PP2A_B56 3 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00165 Bva-Chr4 1033622 1036645 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00165 K11584 - zju:107413231 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00165 04 1033622 1036645 Bva13g02010 13 16092182 16096442 BWGD