Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01989 ATGGGAGAGAAAGTAGAACAGCCGAAGAATGAAACCGAGAAGAAGCCTGATGGGGGAGCCAAGAAGGACGATGGTCCAGCTCCCGTCGTTTTAAAGCTTGACATGCATTGCGAGGGATGCATCAAGAAGATTAAACGGGCCGTTCGTCATACCGAAGGTGTCGAAGACGTAAAGGCAGATATGGCATCTAACAAACTCACGGTGTTTGGCAAGGTGGACCCCGCCAAGGTCCGGGATAGGGTAGCGGAGAAGACGAAGAAGAAGGTGGAACTCATCTCCCCTCAGCCTAAGAAAGATGCCGGCGGCGATAAAAAGCCAGAGGAGAAACCGGAGAAAAAGGCCGATGAGAAGAAACCAGATGACAAAAAAGCCGAAGATAAAAAACCAAAGGAGAGTACGGTGGTTTTGAAGATCAGATTGCATTGTGACGgttgcattaaaaaaattcggAGAATCATACTCAAGATAAAAGGTGTTGAGTCGGTGAACATTGACGGAGCCAAAGATTTAGTAACCGTGAAGGGAACTATGGACGTGAAAGAACTGACGCCGAATCTGAAGGAGAAGCTGAAGAGAAACGTCGAAGTGGTCCCACCCAAGAAAGACGgtggaggagagaaaaaagaaggaggTGGtgacaagaagaaagaaggtgAAGCAAAACCGGCCGCAGATGGCGCCGGTGGCAAAAAAGACGATGCTGCACCTAAGGGGGAGGTTAACAAGTTGGAATACTACGGGTACGGGTACCCACCTCCCTCATACTTGTTCGACGGACACTTACCCGGCCAAGTCAGTACCAACTATGCAATGGAGGTTCAGCCAGGGTATTCAAACCAAGGATATTACCTACCTCCAGGGCCAGGGTACATGAACCATGGATATGTCCAACATGGATATCCGATGGAGGCGGCGCCGATGCCATTCTATATGAATCCTCAACACCCGCATCCTCAGATGTTCAGCGATGAGAATCCCAATGCTTGTTCTGTGATGTG 998 0.4649 MGEKVEQPKNETEKKPDGGAKKDDGPAPVVLKLDMHCEGCIKKIKRAVRHTEGVEDVKADMASNKLTVFGKVDPAKVRDRVAEKTKKKVELISPQPKKDAGGDKKPEEKPEKKADEKKPDDKKAEDKKPKESTVVLKIRLHCDGCIKKIRRIILKIKGVESVNIDGAKDLVTVKGTMDVKELTPNLKEKLKRNVEVVPPKKDGGGEKKEGGGDKKKEGEAKPAADGAGGKKDDAAPKGEVNKLEYYGYGYPPPSYLFDGHLPGQVSTNYAMEVQPGYSNQGYYLPPGPGYMNHGYVQHGYPMEAAPMPFYMNPQHPHPQMFSDENPNACSVM 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01989 332 SUPERFAMILY HMA, heavy metal-associated domain 133 187 IPR036163 GO:0046872
Bva13g01989 332 Gene3D - 26 99 - -
Bva13g01989 332 MobiDBLite consensus disorder prediction 83 131 - -
Bva13g01989 332 CDD HMA 140 175 IPR006121 GO:0046872
Bva13g01989 332 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 1 332 IPR044594 GO:0046872
Bva13g01989 332 ProSiteProfiles Heavy-metal-associated domain profile. 35 83 IPR006121 GO:0046872
Bva13g01989 332 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 332 - -
Bva13g01989 332 MobiDBLite consensus disorder prediction 195 236 - -
Bva13g01989 332 CDD HMA 35 90 IPR006121 GO:0046872
Bva13g01989 332 Gene3D - 130 202 - -
Bva13g01989 332 MobiDBLite consensus disorder prediction 1 27 - -
Bva13g01989 332 MobiDBLite consensus disorder prediction 1 22 - -
Bva13g01989 332 Pfam Heavy-metal-associated domain 33 87 IPR006121 GO:0046872
Bva13g01989 332 Pfam Heavy-metal-associated domain 137 194 IPR006121 GO:0046872
Bva13g01989 332 SUPERFAMILY HMA, heavy metal-associated domain 30 91 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01989 Bva-Chr13 15953860 15956180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01989 - - gmx:100795652 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02545 04 22901918 22904490 Bva13g01989 13 15953860 15956180 BWGD
Bva13g01989 13 15953860 15956180 Bva13g01989 13 15953860 15956180 ECH