Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02545 ATGGGAGAGAAAGACGATGGTCCAGCTCCCGTCGTTTTAAAGCTTGATATGCATTGCGAGGGATGCGTTAACAAGATTAAGAAGGCTGTTCGGCATTTCGAAGGTGTCGAAAATGTAAAGGCGGATATGGCTTCAAACAAACTCACGGTGACTGGCAAGGTGGACCCTACCAAGGTCCGAGATAAGCTGGcggaaaaaattaagaagaaggTGGAACTCATCTCCCCTCAGCCCAAAAAAGATGCCGGCGGCGATAGCAAGCCAGACAAGAAACCGGAGAAGAAGCCCGACGACAAGAAAGCCGAGGACAAAAAAGCCGAAGATAAAAAACCAAAGGAGAGTACGGTGGTTTTGAAGACCAGATTACACTGTGACGGTTGCATTCATAAAATTCGGAAAATCATTCTCAAGATCAAAGGAGTTGAATCGGTGAACATTGACGAAGCCAAGGATTTAGTAACCGTTAAGGGAACCATGGACGGGAAAGAACTGACGCTGTATTTGAAAGAGAAGCTGAAGAGAAGCGTAGAAGTGGTCCCACCCAAGAAAGACGACgataagaaagagaataaagaaggTGGCGttgacaagaagaaagaagccGCCGACGGCGACGGCGGCGAAAAAGACGATGCTGCACAGGTTAACAAGATGGAATACTACGGGTACGGCTACCCGCCTCCCATGTACTGGCACGACGGACACTTACCTGGTCAAGTCGGTACCAGCTACGCAATGGAAGCTCACTCAGAGCATTCAAATCAAGGTTACTACGTAAATCCAGCGTCGGGATACACGAACAACGGATATGCACCGATGCCATTCTATTTGGATCCCCACCACCCGCATCCTCAGATGTTCAGCGATGAGAATCCCAATGCTTGTTCTGTGATGTG 896 0.4565 MGEKDDGPAPVVLKLDMHCEGCVNKIKKAVRHFEGVENVKADMASNKLTVTGKVDPTKVRDKLAEKIKKKVELISPQPKKDAGGDSKPDKKPEKKPDDKKAEDKKAEDKKPKESTVVLKTRLHCDGCIHKIRKIILKIKGVESVNIDEAKDLVTVKGTMDGKELTLYLKEKLKRSVEVVPPKKDDDKKENKEGGVDKKKEAADGDGGEKDDAAQVNKMEYYGYGYPPPMYWHDGHLPGQVGTSYAMEAHSEHSNQGYYVNPASGYTNNGYAPMPFYLDPHHPHPQMFSDENPNACSVM 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02545 298 Pfam Heavy-metal-associated domain 121 177 IPR006121 GO:0046872
Bva04g02545 298 Pfam Heavy-metal-associated domain 15 70 IPR006121 GO:0046872
Bva04g02545 298 SUPERFAMILY HMA, heavy metal-associated domain 114 169 IPR036163 GO:0046872
Bva04g02545 298 ProSiteProfiles Heavy-metal-associated domain profile. 114 177 IPR006121 GO:0046872
Bva04g02545 298 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 3 298 - -
Bva04g02545 298 MobiDBLite consensus disorder prediction 68 113 - -
Bva04g02545 298 CDD HMA 17 69 IPR006121 GO:0046872
Bva04g02545 298 SUPERFAMILY HMA, heavy metal-associated domain 12 73 IPR036163 GO:0046872
Bva04g02545 298 ProSiteProfiles Heavy-metal-associated domain profile. 17 65 IPR006121 GO:0046872
Bva04g02545 298 MobiDBLite consensus disorder prediction 178 213 - -
Bva04g02545 298 Gene3D - 8 81 - -
Bva04g02545 298 Gene3D - 112 185 - -
Bva04g02545 298 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 3 298 IPR044594 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02545 Bva-Chr4 22901918 22904490 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02545 - - gmx:100795652 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02545 04 22901918 22904490 Bva13g01989 13 15953860 15956180 BWGD
Bva04g02545 04 22901918 22904490 Bva04g02545 04 22901918 22904490 ECH