Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01850 ATGGATTCTCTAGCTAAACTGCATCACCGTCACCAACCGCTTCACCTCTCACTCGGTCACCGCCTTCCATCATTTCCAGCACCCACATCCTCGGTCTCGTTTCGTACATTATCGCCTCCGGCGTTACCCCTGCAATTATCGTCGTCGTCATTTATATCATCCCCTATCAGAGCGTCGTTCTCGTCCCCATCGTCGTCCTCCGACCATGTTCCCAGGCACAATCATGCCCGGCTGCtccaaaccctaaacccccTTTTGTCACCTCTCGTCCGAACTACCTGCATTACCATAGCTGCAGCTGCGTTATTCTTCATGCGTCTTCAGCACAAGCCCGCCGTTGCAGTCCCGGTTGCGCCACCCTCTGTGGAATCCACTAGCGAGTCGACGGAAAATATTCCTCtcgaagaaaaagaaagacggATTGAAGAACAATTAAGCGACCATCCCAAAGATGTCGAAGCACTTCGATCTCTCATGGAGGTCAAAATAAGAAGGCGCAAACTGGAAGAAGCAATTCGGGTGGCAAACCGTTTGATCGAACTTGAACCCGATGAGTCTGAGTGGCCACTGCTGAAGGCTCACATGTATATCTACAACGGTGGCTTCGAATCGGCCATAAAAGAGTTCGAAGATATTCTAAAGAAGGACCCATATCGTGTTGAAGCTTATCATGGCCTTGTAGTGGCAACATCGGAATCGGATGGGCCTTTGCAGGATTTGTTGAAGAGGATTGAAATGGCAATGGAGTTTtgcaaaaagcaaaagagcATTGAACATGTCAGGGACTTCAAGCTCTTGATTGCGCAGACTAAAGTTATGGAGGGAGACTATTTTGATGCGCTGAAGGCCTATCAGGAGCTTGTAAAGGAAGAACCAAGAGATTTCAGGCCGTATTTGGGTCAGGGTATACTATACACTTTGCTAAGAAAGAATGATGAAGCGGAGAAACAATTTGAGAAGTTCCGGAAGCTCGtccccaagaatcatccctaTACAGAATTTTTTGAGGAAAATATGTTTCCCGCGAAGTTTTTCTCACAGAAGGTAGAGAGAGAGGCAGCAGGTGCCAAGAGCTA 1076 0.447 MDSLAKLHHRHQPLHLSLGHRLPSFPAPTSSVSFRTLSPPALPLQLSSSSFISSPIRASFSSPSSSSDHVPRHNHARLLQTLNPLLSPLVRTTCITIAAAALFFMRLQHKPAVAVPVAPPSVESTSESTENIPLEEKERRIEEQLSDHPKDVEALRSLMEVKIRRRKLEEAIRVANRLIELEPDESEWPLLKAHMYIYNGGFESAIKEFEDILKKDPYRVEAYHGLVVATSESDGPLQDLLKRIEMAMEFCKKQKSIEHVRDFKLLIAQTKVMEGDYFDALKAYQELVKEEPRDFRPYLGQGILYTLLRKNDEAEKQFEKFRKLVPKNHPYTEFFEENMFPAKFFSQKVEREAAGAKS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01850 358 SMART tpr_5 295 328 IPR019734 GO:0005515
Bva13g01850 358 SMART tpr_5 261 294 IPR019734 GO:0005515
Bva13g01850 358 SMART tpr_5 152 185 IPR019734 GO:0005515
Bva13g01850 358 Coils Coil 158 178 - -
Bva13g01850 358 Pfam Tetratricopeptide repeat 275 327 - -
Bva13g01850 358 Gene3D Tetratricopeptide repeat domain 118 336 IPR011990 GO:0005515
Bva13g01850 358 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 350 - -
Bva13g01850 358 ProSiteProfiles TPR repeat profile. 152 185 IPR019734 GO:0005515
Bva13g01850 358 ProSiteProfiles TPR repeat profile. 295 328 IPR019734 GO:0005515
Bva13g01850 358 SUPERFAMILY TPR-like 155 324 IPR011990 GO:0005515
Bva13g01850 358 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01850 Bva-Chr13 15224963 15227677 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01850 - - twl:119995721 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02666 04 23464303 23465768 Bva13g01850 13 15224963 15227677 BWGD