Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02666 ATGGAGTCTCTGGCTAATCTGCATCATCGTCACCAACCACTTCATCTCTCGATCAATCAGCACCGTTCGTCATTTCCAGTCCTTACCTCCTCGGTCTCATTTCGTACACTATCGCCGCCGGTGTTACCACCGCAATTTTCGTCGTCATCGTTCAAGTTATCACATATCCTTGCGTCGTCCTCATCCCCAGTGTCGTCTCCCGATTCTGTTCCTTGTAAACCCAGGTACACTCTTGCCCAGCTGttccaaaccctaaacccccTTTTCTCACCTATCGTCAGAACCACCTGCATTACGATAGCAACAGCTGCATTATTCTTCATGCGTCTTCAGCACAAGCCCGTCATTGCAGTCCCGGTTGCGCCACCCACTGTGCAGTCCACCAGCGAGTCGACGGAAAATCTTTCTCTCGAAAACAAGGAAAGATTAATTGAAGAACAATTGAGTGACAATCCCAATGATGTCGAAGCACTTCGATCTCTCATGGAGGTAAAAATAAGGGGGCACAAACTTGAAGAAGCAATTCAGGTGATAGATCGTTTGATCGAACTCGAACCAAATGAGTCTGAGTGGCCATTGCTAAAGGCTCACGTGTATACCTACAGCGGTGACTACGAATCGGCCAAAAATGTGTTTGAAGATATTCTGAAGAAAGACCCTTATCGCGTTGAAGGGTATCATGGCCTTGTAATGGCAACTATGGAATCAGATGGGTCTTTGCAGGATTTGCTGAAGAGGATTGGACAAGCAGTGGAGTATtgcaaaaagcaaaagaggatGACAGATGTCAGGGACTTCAAGCTATTGATTGCGCAGATTAAAGTTATGGAGGGAGACTATTCTGATGCGCTGAAGGCTTATCAGGAGCTTGTAAAGGAAGAACCAAGAGATTTCAGGCCGTATTTGTGTCAGGGTATAATATACACTTtgttaagaaagaaagatgaagCCGAGAAACAATTTGCGAAGTTCCGGAAGCTCGTCCCCAAAAATCATCCTTATAAAGAGTATTTTGAGGAAAATATGTTTGCCACCAAGTTTTTCTCTCAGAAGTTAGAGAGAGAGGCAGCAGGTGTTAAAGGCTA 1085 0.4304 MESLANLHHRHQPLHLSINQHRSSFPVLTSSVSFRTLSPPVLPPQFSSSSFKLSHILASSSSPVSSPDSVPCKPRYTLAQLFQTLNPLFSPIVRTTCITIATAALFFMRLQHKPVIAVPVAPPTVQSTSESTENLSLENKERLIEEQLSDNPNDVEALRSLMEVKIRGHKLEEAIQVIDRLIELEPNESEWPLLKAHVYTYSGDYESAKNVFEDILKKDPYRVEGYHGLVMATMESDGSLQDLLKRIGQAVEYCKKQKRMTDVRDFKLLIAQIKVMEGDYSDALKAYQELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFAKFRKLVPKNHPYKEYFEENMFATKFFSQKLEREAAGVKG 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02666 361 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 2 354 - -
Bva04g02666 361 Pfam Tetratricopeptide repeat 194 217 IPR019734 GO:0005515
Bva04g02666 361 SMART tpr_5 298 331 IPR019734 GO:0005515
Bva04g02666 361 SMART tpr_5 264 297 IPR019734 GO:0005515
Bva04g02666 361 SMART tpr_5 155 188 IPR019734 GO:0005515
Bva04g02666 361 SMART tpr_5 189 222 IPR019734 GO:0005515
Bva04g02666 361 ProSiteProfiles TPR repeat profile. 155 188 IPR019734 GO:0005515
Bva04g02666 361 ProSiteProfiles TPR repeat profile. 264 297 IPR019734 GO:0005515
Bva04g02666 361 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 2 354 - -
Bva04g02666 361 Pfam Tetratricopeptide repeat 272 329 - -
Bva04g02666 361 SUPERFAMILY TPR-like 136 326 IPR011990 GO:0005515
Bva04g02666 361 Gene3D Tetratricopeptide repeat domain 122 347 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02666 Bva-Chr4 23464303 23465768 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02666 - - zju:107432791 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02666 04 23464303 23465768 Bva13g01850 13 15224963 15227677 BWGD