Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01808 ATGGAGGAAGCACTGGAACTGGCACGCGCCAAGGACACGAAGGAGAGGATGGCTGGTGTGGAGCGCCTTCATCAACTCTTTGAAGCTTCCAGAAAGAGTCTCACTTCGTCCGAGGTTACTTCCCTCATCGATTGTTGTATGGATCTCTTGAAAGACAACAATTTCAAGGTTTCACAGGGTGCTCTTCAATCTTTGGCTTCTGCTGCTGTGCTTTCTGGCGAGCATTTCAAACTTCACTTCAATGCCCTTGTTCCCGCCATCGTCAACCGACTCGGCGATGCCAAACAACCAGTTCGTGATGCCGCCAGAAGACTCTTACTCACTCTCATGGAGGTTTCTTCTCCCACAATAATTGTTGAAAGAGCTGGATCCTTTGCTTGGACACATAAAAGCTGGAGAGTCAGAGAGGAGTTTGCACGCACTGTGACATCTGCaattggtcttttttcgtctACTGAGCTTACACTCCAGCGAGCTATTCTTCCTCCAATTTTGCAGATGCTGAATGATCCAAATCCTGGTGTTAGGGAAACAGCTATCTTGTGCATTGAGGAGATGTACCGGCAAGCTGGAACTCAATTTCGTGATGAACTTCAGCGCTACGATCTTCCTTCATCTTTGGTGAAAGATATTAATGCGAGGCTAGAGGGCATTCAACCAAAAGTTCGCTCTTCAGATGGTATTCCAAGTAGTTATATTGCTGGAGAAGTTAAGCCTTTGAATGTTAATCCAAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAGACCTCTCTTTTTGGAGGAGAAGGTGATATCACTGAGAAACCCATAGATCCTATCAAGGTGTACTCAGAGAAGGAATTAATCAGGGAATTTGAGAAGATCGCATCTACCCTTGTACCAGATAAGGATTGGTCAATTCGTATTGCTGCCATGCAGAGAGTTGAAGGACTTGTTTTAGGAGGTGCTGCTGACTATCCATGTTTTCGGGGACTCTTGAAGCAACTTGTTGGACCTTTAAGCACACAATTGTCAGATCGAAGGTCTAGCATTGTGAAGCAGGCTTGTCATCTATTGTGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAAGTGTGTGCTGAATTGTTCATACCAGTTCTTTTCAAGTTGGTTGTGATTACTGTACTTGTAATTGCAGAGTCTGCAGATAATTGCATAAAAACGATGTTGCGTAACTGTAAAGTTGCTCGAGTGCTTCCTCATATAGCTGATTGTGCAAAAAATGATCGGGGTGCAGTCCTCCGTGCTAGGTGTTGTGAATATGCCCTTTTGATCCTAGAACATTGGCCTGATGCACCAGAGATACACCGATCAGCTGATTTATATGAGGATATGATAAGGTGTTGTGTTTCAGATGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGCTACAGAATGTTTGCGAAAACTTGGCCAGAACGGTCCCGCCGCCTATTTTCATCCTTTGATCCTGTCATTCAAAGGTTGATAAATGAAGAGGATGGAGGACTACATAGACGACATGCTTCACCTTCCATACGGGATAGAGGTGCATTTATGTCATTAAGTAGTCAAGCCTCTGCTCCAACAAATCTACCTGGATATGGAACTTCAGCTATTGTAGCAATGAATAGAAGTTCAAGTTTATCATCTGGGACATCTGTTTCCTCAGGTTTACTTCTTTCACAAGCTAAGTCTCATGGCAAAAGTACAGAACGTAGTTTGGAAAGTGTGTTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGAGGTTTGGATTTGTCTGATAAGCATAATTCATCTGCTCTCCGATCTTCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCTGCCGCTGTCCCTGCATCTAATAATTTGACAAACTCTTTAACAGCAGAATCAACTGCTTATGGTGTCAATAAAGGTAGTAATAGAAATGGTGGTTTGGGTTTGTCTGACATAATCACCCAAATCCAAGCTTCCAAGGATTCTAGCAAgttattatatcataataaCGTTGCTACTGAGCCTTTGTCAGCATTATCATCATACTCGAGCAAAAGGGCCTCTGGAAGAACACATGAAAGAGGTTCAATCGATGACAACAGTGACAATAGAGAGGGTAGGCGATTTATGAACCCCCACATGGATAGACAGTATTTGGATACACCATATAGAGATGGCAACTTTAGGGATTCACACAATAGTCACGTGCCTAATTTCCAGAGACCACTATCGAGAAAGAATGTAGCTGGAAGAATGTCTGCAGGAAGGAGGAGGAGTTTTGATGATAGCCAGTTATCTATTGGAGAGATATCAAATTATGCAGAAGGACCAGCATCTCTCCATGATGCTCTAAGTGAAGGGCTTAGTTCAGGTTCTGACTGGTCTGCCAGGGTGGCTGCTTTTAACTACCTTCGCTCTTTGTTACAGCAGGGTCCAAAAGGAATTCAAGAAATAATCCAGAGTTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCTCATCATAAAGTTGCACAGGCTGCTCTATCAACACTTGCGGATATTATTCCTGCATGCAGAAAGCCCTTTGAGAGTTACATGGAAAGAATATTGCCCCATGTGTTCTCTAGGTTAATTGACCCCAAAGAGCTTGTTAGGCAGCCATGCTCTCTGACTTTGGAAATTGTTAGCAAAACATACAGTATAGATTCTCTCTTGCCTGCATTGCTCCGCTCACTAGATGAACAAAGGTCTCCAAAGGCAAAATTGGCTGTTATTGAGTATGCAATTAGTTCCTTTAACAAGCATGCAGTGAATCCAGAAGGTGCCGCTAATACTGGTATCCTGAAATTATGGCTTGCCAAGTTAAGTCCCCTGGCTCATGATAAAAATACCAAGCTTAAAGAAGCTGCTATTACATGCATTATATCAGTGTACTCTCACTTTGATTCGGCTGCAGTTCTGAATTTCATTCTTAGTCTGTCAGTTGAAGAACAAAATTCATTGAGACGAGCCCTTAAGCAGTACACTCCTCGCATTGAAGTAGACCTAATTAACTATCTGCAGAGCAAGAAGGAGCGACAGCGTTCTAAGTCTTCCTATGATCCATCTGATGTTGTTGGAACATCCTCTGAAGAGGGATATGTAAGTGTGTCAAGGAAAGCTCAATACCTTGGAAGGTATTCTGCTGGTTCCCTAGACAGTGACGGTGGTAGGAAGTGGAGTTCCCAAGATTCATCTTTGATTAAAGCCAGCCTTCGCCAAACCACTTCTAGTGAAACTCAGGATGCCTCATATGAAAATCTTGAGACTGATTCTAATAGTGGTATTCTTGATTTGAAAACTAAGGATGGTTATCAAGTCAATCCGTTGGGTCAGAGCTTGGGTTCTCAAACTAATGAACTTGGGCATGCAAACAGTAGTGTGAACTTTGAGGGTCTGTCAACTCCTCGTCTGGATGTTAATGGGCTGATGTCCTTAGAACAATTAAATGCCACTGAAGACTCCGggaatgaaaaaggaaatacttCTGAATTAGACCTTAATGGTCATTCAGCTGAAGCTTTAAAGATTAACTCATTAACAGACACAGGACCCAGCATTCCTCAAATTCTTCATCTGATATGTAGTGGTGGTGACGGAAGCCCTATTTCACGTAAGCGGTCTGCACTTCAACAGCTAGTTGAAGCTTCTATAGCAAATGATCATTCTATTTGGACTAAGTACTTCAATCAGATTCTAACGGTTGTGCTCGAGGTGGTGGATGATTCAGATTCCTCCATCAGGGAGCTTGCTCTTTCTTTGATAGTTGAAATGCTTAAAAATCAGAAAGATGCAATGGAAGATTCAGTTGAGATTGTAATTGAGAAGCTGCTTCATGTTACAAAAGATATCATTCCCAAGGTCTCAAATGAAGCAGAACACTGCCTGACCATCGTTTTATCTCAGTACGATCCATTCAGATGTTTAAgtGTTGTTGTCCCGTTACTGGTAACTGAAGATGAGAAAACTCTGGTGACTTGCATAAATTGCTTAACAAAGCTTGTGGGGCGGCTCTCTCAGGAAGAGCTGATGGCTCAGTTACCCTCATTTCTGCCTGCTCTTTTTGAGGCATTTGGAAACCAGAGTGCAGATGTTCGTAAGACTGTTGTTTTCTGTCTAGTGGATATTTATATCATGCTTGGGAAAGCATTCTTGCCCTACTTGGGAGGGCTCAACAGCACGCAGTTGAGGTTGGTCACCATTTATGCAAATCGAATCTCACAAGCCAGGACAGGCACGGCAATTGATGCCACTCATGATTA 4337 0.4238 MEEALELARAKDTKERMAGVERLHQLFEASRKSLTSSEVTSLIDCCMDLLKDNNFKVSQGALQSLASAAVLSGEHFKLHFNALVPAIVNRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTHKSWRVREEFARTVTSAIGLFSSTELTLQRAILPPILQMLNDPNPGVRETAILCIEEMYRQAGTQFRDELQRYDLPSSLVKDINARLEGIQPKVRSSDGIPSSYIAGEVKPLNVNPKKSSPKAKSSSRETSLFGGEGDITEKPIDPIKVYSEKELIREFEKIASTLVPDKDWSIRIAAMQRVEGLVLGGAADYPCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEVCAELFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPHIADCAKNDRGAVLRARCCEYALLILEHWPDAPEIHRSADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGLHRRHASPSIRDRGAFMSLSSQASAPTNLPGYGTSAIVAMNRSSSLSSGTSVSSGLLLSQAKSHGKSTERSLESVLHASKQKVTAIESMLRGLDLSDKHNSSALRSSSLDLGVDPPSSRDPPFPAAVPASNNLTNSLTAESTAYGVNKGSNRNGGLGLSDIITQIQASKDSSKLLYHNNVATEPLSALSSYSSKRASGRTHERGSIDDNSDNREGRRFMNPHMDRQYLDTPYRDGNFRDSHNSHVPNFQRPLSRKNVAGRMSAGRRRSFDDSQLSIGEISNYAEGPASLHDALSEGLSSGSDWSARVAAFNYLRSLLQQGPKGIQEIIQSFEKVMKLFFQHLDDPHHKVAQAALSTLADIIPACRKPFESYMERILPHVFSRLIDPKELVRQPCSLTLEIVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEYAISSFNKHAVNPEGAANTGILKLWLAKLSPLAHDKNTKLKEAAITCIISVYSHFDSAAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLINYLQSKKERQRSKSSYDPSDVVGTSSEEGYVSVSRKAQYLGRYSAGSLDSDGGRKWSSQDSSLIKASLRQTTSSETQDASYENLETDSNSGILDLKTKDGYQVNPLGQSLGSQTNELGHANSSVNFEGLSTPRLDVNGLMSLEQLNATEDSGNEKGNTSELDLNGHSAEALKINSLTDTGPSIPQILHLICSGGDGSPISRKRSALQQLVEASIANDHSIWTKYFNQILTVVLEVVDDSDSSIRELALSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDIIPKVSNEAEHCLTIVLSQYDPFRCLSVVVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLGGLNSTQLRLVTIYANRISQARTGTAIDATHD 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01808 1445 MobiDBLite consensus disorder prediction 605 637 - -
Bva13g01808 1445 PANTHER CLASP 28 1437 - -
Bva13g01808 1445 PANTHER PROTEIN, PUTATIVE-RELATED 28 1437 - -
Bva13g01808 1445 Pfam CLASP N terminal 284 500 IPR024395 -
Bva13g01808 1445 Pfam CLASP N terminal 804 997 IPR024395 -
Bva13g01808 1445 Pfam CLASP N terminal 58 190 IPR024395 -
Bva13g01808 1445 SMART TOG_3 1201 1437 IPR034085 -
Bva13g01808 1445 SMART TOG_3 3 224 IPR034085 -
Bva13g01808 1445 SMART TOG_3 270 514 IPR034085 -
Bva13g01808 1445 SMART TOG_3 787 1030 IPR034085 -
Bva13g01808 1445 MobiDBLite consensus disorder prediction 702 724 - -
Bva13g01808 1445 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Bva13g01808 1445 Coils Coil 1281 1301 - -
Bva13g01808 1445 Gene3D - 1228 1436 IPR011989 -
Bva13g01808 1445 Gene3D - 1 221 IPR011989 -
Bva13g01808 1445 MobiDBLite consensus disorder prediction 605 619 - -
Bva13g01808 1445 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Bva13g01808 1445 MobiDBLite consensus disorder prediction 239 267 - -
Bva13g01808 1445 MobiDBLite consensus disorder prediction 693 724 - -
Bva13g01808 1445 SUPERFAMILY ARM repeat 288 1435 IPR016024 -
Bva13g01808 1445 MobiDBLite consensus disorder prediction 246 261 - -
Bva13g01808 1445 Gene3D - 267 506 IPR011989 -
Bva13g01808 1445 MobiDBLite consensus disorder prediction 1096 1122 - -
Bva13g01808 1445 Gene3D - 798 1021 IPR011989 -
Bva13g01808 1445 SUPERFAMILY ARM repeat 5 402 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01808 Bva-Chr13 15003227 15014707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01808 K16578 - gmx:100820523 2427.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02704 04 23626160 23637576 Bva13g01808 13 15003227 15014707 BWGD
Bva13g01808 13 15003227 15014707 Bva13g01808 13 15003227 15014707 ECH