Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02704 ATGGAGGAAGCACTGGAACTTGCACGCGCCAAGGACACGAAGGAGAGGATGGCTGGTGTGGAGCGCCTTCATCAACTCTTAGAAGCTTCTAGAAAGAGTCTTACTTCGTCCGAGGTTACTTCCCTTATAGATTGTTGTATGGATCTCTTGAAAGACAACAATTTCAAGGTCTCGCAGGGTGCTCTTCAATCTTTGGCCTCTGCTGCTGTGCTGTCAGGCGagcatttcaaaattcatttcaaTGCCCTTGTTCCCGCCGTCGTCGACCGACTTGGCGATGCCAAACAACCAGTTCGTGACGCTGCCAGAAGACTCTTGCTCACTCTTATGGAGATTTCTTCTCCCACCATTATTGTTGAAAGAGCTGGATCCTTTGCTTGGACACATAAAAGCTGGAGAGTCAGAGAGGAGTTTGCACGCACTGTCACATCTGCAATTGGTCTATTTGCATCTACTGAGCTTACGCTCCAGCGGGCTATTCTTCCTCCGATTTTGCAGATGCTGAATGATCCAAATCCTGGTGTTAGGGATGCGGCTATTTTGTGCATTGAGGAAATGTACAGGCAAGCTGGAACTCAATTTCGTGATGAACTTCAGCGCTACAACCTTCCTTCATTTTTgTTGAAAGATATTAATGCGAGGCTAGAGGGCATTCAACCAAAAGTTCGTTCTTCAGATGGTATTCCAAGTACTTATATTACCGGAGAAACTAAGCCTTTGAGCGTTAATCCAAAGAAAAGTAGTCCAAAGGTTAAAAGTTCATCAAGAGAGACCTCTGTTTTTGGAGGAGAAGGTGATGTCACAGAGAAACCCATAGATCCTATCAAGGTGTACTCAGAGAAGGAGTTAATCAGGGAATTTGAGAAGATCGCATCTAACCTTGTACCAGAAAAGGACTGGTCAGTTCGTATTGCTGCCATGCAGAGAGTTGAAGGACATGTGTTAGGAGGTGCTACTGACTATCCATGTTTTCGGGGACTGCTAAAGCAACTTGCGGGACCTTTAAGCACCCAATTGTCAGATCGAAGGTCTAGCATTGTGAAGCAGgCTTGTCATCTGTTGTGCTTTTTGTCAAAGGAGCTCTTGGGTGATTTTGAAGGATGTGCTGAAATGTTCATACCAGTTCTTTTCAAGTTGGTTGTGATTACTGTACTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGCTGCGTAACTGTAAAGTTGCCAGAGTGCTTCCTCGTATAGCTGATTGTGCAAAAAATGATCGGAGTGCAGTACTCCGTGCAAGGTGTTGTGAATATGCCTTCTTGATCCTAGAACATTGGCCTGATGCGCCAGAGATACAACGATCAGCTGATTTGTATGAGGATATGATAAGGTGTTGTGTTTCAGATGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCTGAGAGGTCCCGCCGCCTATTTTTGTCCTTTGACCCAGTTATTCAAAGGTTAATAAATGAAGAGGATGGAGGACTACATAGGCGACATGCTTCTCCTTCCATACGTGATAGAGGTGCATTGATGTCATTAACTAGTCAAGCCTCTGCTCCAGCAAATCTACCTGGATATGGAACTTCTGCTATTGTAGCGATGGATAGAAGTTCAAGTTTATCATCTGGGACATCTGTTTCCTCAGGTGTACTTCTTTCACAAGCTAAGTCACATGGCAAAGGTACAGAGCGTAGTTTGGAAAGTGTGTTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGAGGTTTGGATTTGTCTGGTAAACATAATTCATCCACTCTCCGGTCTTCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCTGCTGCTGTCCCAGCATCTAATAATTTGACAAACTCTTCAACAACAGATTCAAGTGCTTATGGTGTCAATAAAGGTAGTAATCGAAATGGTGGTTTGGGTTTGTCTGACATAATCACCCAAATTCAAGCTTCCAAAGATTCTGGGAAGTTATTATATCATAGTAATGTTGCTACCGAGCCTTTATCAGCATTATCATCATACTCAAGTAAAAAGGCGTCTGAAAGACCACATGAAAGAGGTTCAATTGATGACAACGGTGACATTAGGGAGGCTAGGCGATTTGTGAACCCTCACATGGATAGGCAGTATTTGGATACATCATACAGAGATGGCAACTTTAGGGATTCACACAATAGTCACATGCCTAATTTCCAGAGGCCACTATTGAGAAAGAATGCAGCTGGACGAATGTCTGCAGCCAGGAGGAGGAGTTTTGATGATAGCCAGTTATCTCTTGGAGAGATGTCAAATTATGCTGAAGGACCAGCATCTCTCCATGATGCTCTGACTGAAGGGCTTAGTTCAGGGTCTGACTGGTCTGCTAGGGTTGCTGCTTTTAACTATATTCGCTCTTTGTTACAGCAAGGTCCAAGAGGAATTCAGGAAATAGTCCAGAATTTTGAGAAGGTGATGAAGTTGTTTTTCCAGCACTTGGATGATCCTCACCATAAAGTTGCACAGGCTGCTCTTTCAACACTCGCTGATATTATTCCAGCATGCAGAAAGCCCTTTGAGAGTTACATGGAAAGAATATTACCCCATGTGTTCTCTCGGTTAATTGATCCTAAAGAGCTTGTTAGGCAACCTTGCTCTCTGACTTTGGAAATAGTTAGCAAAACTTACACTACTGATTCTCTCTTACCTGCATTGCTCCGCTCACTAGATGAACAAAGATCTCCAAAGGCAAAATTGGCTGTTATTGAGTATGCAATCCGTTCCTTTAACAAACATGCAATGAATCCAGAAGGTGCTGCTAACCCTGGCATCCTTAAATTATGGCTTTCCAAGTTAAGCCCCCTGGTTCATGACAAAAATACCAAGCTTAAAGAAGCAGCTATTACGTGCATTATATCAATGTACTCTCACTTTGATTCAGCTGCAGTTCTGAATTTCATTCTTAGTTTGTCAGTTGAAGAACAAAATTCATTGAGACGAGCCCTTAAGCAATACACACCACGCATTGAAGTAGATCTAATGAACTATCTGCAGAGCAAGAAAGAGCGACAGCGCTTCAAGTCTTCCTATGATCCATCTGATGTTGTTGGAACATCCTCTGAAGATGGATATTTAGGTGTGTCAAGGAAAGCTCAATACCTTGGAAGGTATTCTGCTGGTTCCCTAGACAGTGACGGTGGTAGGAAGTGGAGTTCCCAAGATTCAACTCTGATTAAAGCCAGTCTCGGCCAAACCACTTCTAGTGAAACTCAGGAGACCTCATATCAAAATCTTGAGACCGATTCTAATAGTGGTCTTCTAATTTCGAAATCTAAGGATGCTTACTCAGTCAATCCATTGGGTCAAAACTTGGGCTCTCAAACTAATCAACTCGGACATGCAGACATTAGTATGAACTTTGAGGGTCTGTCAACTCCTCATCTGGATGTTAATGGTCTGATGTCCTTAGAACAATTAAATGTCACTGAAGAATTTGGgcatgaaaaagaacataCTGCTGAATTGGACCTTAATGACCACTCAGCTGAATCTGTAAAGATTAACTCATTAACAGACACAGGACCCAGCATTCCTCAAATTCTTCATCAGATATGCAGTGGTGGGGATGGAAGCCCTATATCACGAAAGCGGTCTGCACTTCAACAACTAGTTGAAGCTTCTATAGCAAATGATCATTCTATTTGGACTAAGTACTTCAATCAGATCCTAACAGTTGTGCTCGAGGTGTTGGATGATTCGGATTCATCAATCAGGgagcttgctctttcattaaTAGTTGAAATGCTTAAAAATCAGAAAGATGCAATGGAGGATTCAGTTGAGATTGTAATTGAGAAACTGCTTCATGTTACAAAAGATATCATTCCTAAGGTTTCAAATGAAGCAGAGCACTGCCTGACCATTGTTTTATCTCAGTATGATCCATTCAGATGTTTAAGTGTTGTTGTCCCTTTACTGGTTACTGAAGATGAGAAAACTCTGGTGACTTGCATAAATTGCTTGACAAagCTTGTGGGGAGGCTCTCTCAGGAAGAACTGATGGCTCAGTTACCCTCATTTCTGCCTGCTCTTTTCGAAGCATTTGGAAACCAGAGTGCAGATGTTCGTAAGACTGTTGTTTTCTGTCTTGTGGATATTTATATCATGCTTGGGAAAGCATTCTTGCCATACTTGGAACGGCTTAACAGCACGCAGTTGAGATTGGTCACAATTTATGCAAATCGAATCTCACAAGCCAGGACAGGCAGGGCAATTGATGCGGCTCATGATTA 4337 0.4217 MEEALELARAKDTKERMAGVERLHQLLEASRKSLTSSEVTSLIDCCMDLLKDNNFKVSQGALQSLASAAVLSGEHFKIHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEISSPTIIVERAGSFAWTHKSWRVREEFARTVTSAIGLFASTELTLQRAILPPILQMLNDPNPGVRDAAILCIEEMYRQAGTQFRDELQRYNLPSFLLKDINARLEGIQPKVRSSDGIPSTYITGETKPLSVNPKKSSPKVKSSSRETSVFGGEGDVTEKPIDPIKVYSEKELIREFEKIASNLVPEKDWSVRIAAMQRVEGHVLGGATDYPCFRGLLKQLAGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEGCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRSAVLRARCCEYAFLILEHWPDAPEIQRSADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFLSFDPVIQRLINEEDGGLHRRHASPSIRDRGALMSLTSQASAPANLPGYGTSAIVAMDRSSSLSSGTSVSSGVLLSQAKSHGKGTERSLESVLHASKQKVTAIESMLRGLDLSGKHNSSTLRSSSLDLGVDPPSSRDPPFPAAVPASNNLTNSSTTDSSAYGVNKGSNRNGGLGLSDIITQIQASKDSGKLLYHSNVATEPLSALSSYSSKKASERPHERGSIDDNGDIREARRFVNPHMDRQYLDTSYRDGNFRDSHNSHMPNFQRPLLRKNAAGRMSAARRRSFDDSQLSLGEMSNYAEGPASLHDALTEGLSSGSDWSARVAAFNYIRSLLQQGPRGIQEIVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIIPACRKPFESYMERILPHVFSRLIDPKELVRQPCSLTLEIVSKTYTTDSLLPALLRSLDEQRSPKAKLAVIEYAIRSFNKHAMNPEGAANPGILKLWLSKLSPLVHDKNTKLKEAAITCIISMYSHFDSAAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLMNYLQSKKERQRFKSSYDPSDVVGTSSEDGYLGVSRKAQYLGRYSAGSLDSDGGRKWSSQDSTLIKASLGQTTSSETQETSYQNLETDSNSGLLISKSKDAYSVNPLGQNLGSQTNQLGHADISMNFEGLSTPHLDVNGLMSLEQLNVTEEFGHEKEHTAELDLNDHSAESVKINSLTDTGPSIPQILHQICSGGDGSPISRKRSALQQLVEASIANDHSIWTKYFNQILTVVLEVLDDSDSSIRELALSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDIIPKVSNEAEHCLTIVLSQYDPFRCLSVVVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLERLNSTQLRLVTIYANRISQARTGRAIDAAHD 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02704 1445 PANTHER PROTEIN, PUTATIVE-RELATED 28 1437 - -
Bva04g02704 1445 MobiDBLite consensus disorder prediction 226 265 - -
Bva04g02704 1445 SUPERFAMILY ARM repeat 2 402 IPR016024 -
Bva04g02704 1445 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Bva04g02704 1445 MobiDBLite consensus disorder prediction 692 716 - -
Bva04g02704 1445 PANTHER CLASP 28 1437 - -
Bva04g02704 1445 MobiDBLite consensus disorder prediction 701 716 - -
Bva04g02704 1445 SMART TOG_3 781 1026 IPR034085 -
Bva04g02704 1445 SMART TOG_3 270 514 IPR034085 -
Bva04g02704 1445 SMART TOG_3 3 224 IPR034085 -
Bva04g02704 1445 SMART TOG_3 1191 1437 IPR034085 -
Bva04g02704 1445 Pfam CLASP N terminal 804 997 IPR024395 -
Bva04g02704 1445 Pfam CLASP N terminal 284 500 IPR024395 -
Bva04g02704 1445 Gene3D - 267 506 IPR011989 -
Bva04g02704 1445 MobiDBLite consensus disorder prediction 602 619 - -
Bva04g02704 1445 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Bva04g02704 1445 Coils Coil 1281 1301 - -
Bva04g02704 1445 MobiDBLite consensus disorder prediction 602 661 - -
Bva04g02704 1445 MobiDBLite consensus disorder prediction 634 661 - -
Bva04g02704 1445 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Bva04g02704 1445 MobiDBLite consensus disorder prediction 226 261 - -
Bva04g02704 1445 Gene3D - 797 1021 IPR011989 -
Bva04g02704 1445 Gene3D - 1227 1436 IPR011989 -
Bva04g02704 1445 Gene3D - 1 221 IPR011989 -
Bva04g02704 1445 SUPERFAMILY ARM repeat 299 1435 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02704 Bva-Chr4 23626160 23637576 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02704 K16578 - gmx:100820523 2418.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02704 04 23626160 23637576 Bva13g01808 13 15003227 15014707 BWGD
Bva04g02704 04 23626160 23637576 Bva04g02704 04 23626160 23637576 ECH