Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02665 ATGGACTCTCCTCAGTCTGTTGTATCACCATTCAAGAGCTCTGTCTTGGGTGAGAGTGAGAAGCAGAAGTCTGACTTTTTGACAAACAGCTCAGGTCCTTTGTCCAAGGACATTCAGATTAACGGAAAGGAAGCAGTCATGTCTAATGTAGAGGACCATATAGGTGTTCTTGATGTTCACATACACCAGGCTAGAGACATCCATAACATCTGTATATACCACAAGCAAGATGTTTATGCTAAGATTTGTCTCACTAGCAACCCTGAGATCACAATGTCTACCAAAACCATCAATGGAGGAGGAAGGAACCCTGTCTTTAATGAGACTTTGCATATAAACGTTGGAACTGTTGAATCTTCTCTGAAGTGTGAGATATGGATGCTGAGTAGGGTGAAGAATTATCTTGAAGACCAGTTGCTTGGCTTTGCTTTGGTGCCTTTGTCTGAAGTGCTTGTCAAGAATGGGAAACTTGAGAAAGagttctctctttcttctacCGATCTATTCCATTCCCCAGCAGGTTTTGTTCAATTATCTCTTGCATACACTGGTGCTTCACCTGATGTTATGGCTATTCCGGCAGAGATGGCCACAAATGTCCCTGTTCAGGACTCGGAAACATCCGAGGCACTAGCCAGTGATTTAGATAAGATTGAGTTCCCGGATCcaaaaattgtaaatgaaGACCACCTGATGGTTTCAGAGTATTTTGGCATTTCATGTGAGGAGACTCAGTGCTCTGAAAGCTTGAACACTTCTGATGCTGAAAATCACAGTTGTGAAGCAGGTGTTCAGCTTGTGGAAAGCATCTCGGCTTGCAGCGTGGGTTCTGCTCCGCCTCCTAAGGTCGATTCTCCCCCCAGCAGCGTGTCAACAAATGGGGTTTCTTCTCCATCACTGCCTGCAAGCTCAGAGTCATCTGATTCAGCTGCTGCTTCTAAGTATCCAATTCAGGAACAAGTTTCAGGCACCAAAGAGCAAGATGTGAAAACTCTGGATGTTAAAGATGCTGAAAGTGATTCCTCAAACGGGGCGCCTCATGATTCATCCCCAAAGCCTGTTTTGACTGTGAACATTGAGCCAGAGCCAACGGTGGTGCAGCAGGATATAGTAGACATGTACATGAAAAGCATGCAGCAATTTACTGAGTCATTAGCAAAAATGAAGCTTCCTTTGGACATTGAAAGTGGGCCAACTAGTTCAGGGAGTTCAAGCTCTGAGCAAAAACTACAATCAAAGAACAGTAACCCCCGTGTGTTTTACGGGAGTAGAGCTTTCTTCTG 1283 0.4357 MDSPQSVVSPFKSSVLGESEKQKSDFLTNSSGPLSKDIQINGKEAVMSNVEDHIGVLDVHIHQARDIHNICIYHKQDVYAKICLTSNPEITMSTKTINGGGRNPVFNETLHINVGTVESSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVKNGKLEKEFSLSSTDLFHSPAGFVQLSLAYTGASPDVMAIPAEMATNVPVQDSETSEALASDLDKIEFPDPKIVNEDHLMVSEYFGISCEETQCSESLNTSDAENHSCEAGVQLVESISACSVGSAPPPKVDSPPSSVSTNGVSSPSLPASSESSDSAAASKYPIQEQVSGTKEQDVKTLDVKDAESDSSNGAPHDSSPKPVLTVNIEPEPTVVQQDIVDMYMKSMQQFTESLAKMKLPLDIESGPTSSGSSSSEQKLQSKNSNPRVFYGSRAFF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02665 427 PANTHER EXPRESSED PROTEIN 1 427 - -
Bva12g02665 427 MobiDBLite consensus disorder prediction 1 30 - -
Bva12g02665 427 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 52 184 IPR035892 -
Bva12g02665 427 MobiDBLite consensus disorder prediction 396 419 - -
Bva12g02665 427 Pfam C2 domain 55 161 IPR000008 -
Bva12g02665 427 Gene3D C2 domain 50 207 IPR035892 -
Bva12g02665 427 MobiDBLite consensus disorder prediction 326 342 - -
Bva12g02665 427 MobiDBLite consensus disorder prediction 392 427 - -
Bva12g02665 427 CDD C2 57 163 - -
Bva12g02665 427 SMART C2_3c 56 159 IPR000008 -
Bva12g02665 427 MobiDBLite consensus disorder prediction 287 325 - -
Bva12g02665 427 MobiDBLite consensus disorder prediction 274 361 - -
Bva12g02665 427 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 427 - -
Bva12g02665 427 ProSiteProfiles C2 domain profile. 30 161 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02665 Bva-Chr12 19581028 19583636 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02665 - - gmx:100804602 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01099 12 10834029 10836631 Bva12g02665 12 19581028 19583636 BWGD
Bva12g02665 12 19581028 19583636 Bva12g02665 12 19581028 19583636 ECH