Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01099 ATGGACTCCCCACAATCTGTTGTATCACCATTTAAGAGCTCCGTCTTGGGTGAGAGTGAGAAGCAGAAGTCTGATTTTTTCACCGGGAGCTCAGGTCCTCTGTCCAAGGACATTGAGGTCAATGGAAAGGAAGCAGTCATGTCTAATGTGGAGGACTATATTGGTGTTCTTGACGTTCACATCCATCAGGCCAGAGACATCCATAACATCTGCATATACCACAAGCAAGATGTTTACGCTAAGATTTTCCTCACAAGCAACCCCGAGAACACAGTGTCTACCAAAACCATCAATGGTGGAGGAAGGAACCCTGTCTTCAATGAGACTCTGCGTATAAATGTTGAAACTGTTGAGTCTTCTTTGAAATGTGAGATATGGATGCTGAGCAGGGTGAAGAATTATCTTGAAGACCAGTTGCTTGGCTTTTCTTTGGTGCCTTTGTCGGAAGTGCTTGTCAAGAATGGGAAACTAGAGAAAGagttctctctttcttctaatGATCTATTCCATTCCCCGGCAGGTTTTGTTCACTTGTCTCTTACATACACTGGTGCTTCACCTGATGTTATGGCTATTCCGGTGGAGGTAGCCACTGATGTCACCGTTCAGGACTCAGAAACATCTGAGGCACTAGCCAGTGACTTAGATAAAATTGAGTTCCCGGATCCAAAAATTGTCAATGAAGACCATCTGATGGCTTCAGAGTATTTTGGCATCCCATGTGAGGAGACTAAGTTCTGTGAAAGCTTGAACACTTCTGATACTGAAAATCAGAGTTGTGAAGCAGGTGTTCAGCTTGTGGAAAGCTTCTCAGCTTGCAGTGTGGCTTCTGCTCCACCTCCTAAGGTTGATTCTCCCCCCAGCAGTGTGTCAACAAATGGGGTTTCTTCTCCATCGTTGCCTGCAACCTCAGAGTCATCTGATTCTGGTGCTGCTTCCAAACCTCCCATCCAGGAACAAGTTTCAGGCACTAAAGAGAAAAGTGTGGACATTAAAGATGGAGAAAGTGATTCCTCAAACGGGGTGCCTCACGATTCTTTCCCAAAGCCCGTTGTGACTGTGAACATTGAGCCAGAGCCAACGGTGGTGCAGCAGGATATAGTAGACATGTATATGAAAAGCATGCAGCAATTTACCGAGTCATTGGCGAAAATGAAGCTTCCTTTGGACATTGAAAGCGGGCCAACTAGTTCAGGCAATTCAAGCTCGGAGCAGAAACTACAGGCATCAAAGAACAGTAACCCTCGCGTGTTTTATGGCAGTAGAGCTTTCTTCTG 1277 0.4495 MDSPQSVVSPFKSSVLGESEKQKSDFFTGSSGPLSKDIEVNGKEAVMSNVEDYIGVLDVHIHQARDIHNICIYHKQDVYAKIFLTSNPENTVSTKTINGGGRNPVFNETLRINVETVESSLKCEIWMLSRVKNYLEDQLLGFSLVPLSEVLVKNGKLEKEFSLSSNDLFHSPAGFVHLSLTYTGASPDVMAIPVEVATDVTVQDSETSEALASDLDKIEFPDPKIVNEDHLMASEYFGIPCEETKFCESLNTSDTENQSCEAGVQLVESFSACSVASAPPPKVDSPPSSVSTNGVSSPSLPATSESSDSGAASKPPIQEQVSGTKEKSVDIKDGESDSSNGVPHDSFPKPVVTVNIEPEPTVVQQDIVDMYMKSMQQFTESLAKMKLPLDIESGPTSSGNSSSEQKLQASKNSNPRVFYGSRAFF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01099 425 ProSiteProfiles C2 domain profile. 30 161 IPR000008 -
Bva12g01099 425 MobiDBLite consensus disorder prediction 287 324 - -
Bva12g01099 425 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 425 - -
Bva12g01099 425 MobiDBLite consensus disorder prediction 389 414 - -
Bva12g01099 425 MobiDBLite consensus disorder prediction 275 353 - -
Bva12g01099 425 MobiDBLite consensus disorder prediction 393 414 - -
Bva12g01099 425 MobiDBLite consensus disorder prediction 1 28 - -
Bva12g01099 425 CDD C2 57 163 - -
Bva12g01099 425 SMART C2_3c 56 159 IPR000008 -
Bva12g01099 425 PANTHER EXPRESSED PROTEIN 1 425 - -
Bva12g01099 425 Pfam C2 domain 55 161 IPR000008 -
Bva12g01099 425 Gene3D C2 domain 50 203 IPR035892 -
Bva12g01099 425 MobiDBLite consensus disorder prediction 325 339 - -
Bva12g01099 425 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 185 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01099 Bva-Chr12 10834029 10836631 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01099 - - gmx:100796499 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01099 12 10834029 10836631 Bva12g02665 12 19581028 19583636 BWGD