Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02638 ATGAAAGTTTTGGTCAATGGTCTCTCCCAATCTTCGTCCCTATATTGGGGTTCTTGTTTCACTCGTCATTCTCCAAATCAATCCgctcctctctttcttgggcTCAAGAATTTCCCATCTTGCCACGCAGTTGGCCCTCTAgcccctttctctttctcctttcttcctAAGCCCTTCTGCAAATCAATGGCTACTTGTGTTGATGCTAACCCACTTTCCCGGAAGCCAGATGGGTCCCAAACAGATAATTATTCTGGCAATTATGCAAATTTCTGCCGACCCAGTTTCTCTGATGCCGTTCCCTCGGCGCCTGTTTGCAACAACGTGAGGACCTTGCATACGCGCACAGTTGTGGATGAAACTGGCAAGGAAGCGGAACTAGAAGACCTGTGGCTGAAGATGCAAGACGAAGCTCGAATCGATGTTGATCAGGAGCCGATTTTGTCTACTTATTATTGTACTTTAATTTTGTCCCATAAATCGTTAGAATCTGCATTGGCTAATCATCTGGCTATCAAATTGAGCAGTTCAAGTCTCCCCAGTGGGACCCTGTTTGAGATTTTCTCAGGAATCCTCTCGGAAGATGAGGAAATAATGGGGGCTGTGAAGGATGACTTGAGAGCAGTGAAAGAAAGAGACCCTGCTTGCATAAGCTACGTGCTTTGTTTCTTGAATTTCAAAGGGTTTCTGGCATGCCAAGCTCACAGGGTGGCTCACAAATTGTGGTTACAGGGCAGAAAGGTTTTGGCACTTTTGATTCAGAACAAGGTTTCTGAAGTTTTTGCGGTGGATATTCACCCCGGAGCTAAAATAGGACGTGGGTTTTTGCTTGACCACGCAACTGGACTCGTGGTGGGAGAAACTGCAGTGATTGGGAACAATGTGTCAATTTTGCACAATGTGACACTGGGTGGAACTGGAAAGGTTAGTGGGGATAGGCACCCAAAGATTGGCGATGGTGTGCTGATAGGCGCAGGAGCTTGTATTCTGGGCAACATAAAGATTGGCGATGGGGCAAAGATTGGTGCTGCTTCAGTGGTGCTGAAGGACGTGCCTGCAAGGACTACTGCAGTTGGCAACCCAGCCAAATTGATGGCACGCAAGTTGGATAAGATTCCTAGCTTGACCATGGACCATACTTCACATATTGCCGAATGGTCTGATTACGTTATTTA 1175 0.4468 MKVLVNGLSQSSSLYWGSCFTRHSPNQSAPLFLGLKNFPSCHAVGPLAPFSFSFLPKPFCKSMATCVDANPLSRKPDGSQTDNYSGNYANFCRPSFSDAVPSAPVCNNVRTLHTRTVVDETGKEAELEDLWLKMQDEARIDVDQEPILSTYYCTLILSHKSLESALANHLAIKLSSSSLPSGTLFEIFSGILSEDEEIMGAVKDDLRAVKERDPACISYVLCFLNFKGFLACQAHRVAHKLWLQGRKVLALLIQNKVSEVFAVDIHPGAKIGRGFLLDHATGLVVGETAVIGNNVSILHNVTLGGTGKVSGDRHPKIGDGVLIGAGACILGNIKIGDGAKIGAASVVLKDVPARTTAVGNPAKLMARKLDKIPSLTMDHTSHIAEWSDYVI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02638 391 Pfam Bacterial transferase hexapeptide (six repeats) 314 347 IPR001451 -
Bva12g02638 391 Gene3D serine acetyltransferase, domain 1 114 263 IPR042122 -
Bva12g02638 391 TIGRFAM cysE: serine O-acetyltransferase 202 363 IPR005881 GO:0005737|GO:0006535|GO:0009001
Bva12g02638 391 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 323 351 IPR018357 GO:0016740
Bva12g02638 391 CDD LbH_SAT 261 361 IPR045304 -
Bva12g02638 391 PANTHER SERINE O-ACETYLTRANSFERASE, SERINE ACETYLTRANSFERASE-RELATED 80 391 - -
Bva12g02638 391 SUPERFAMILY Trimeric LpxA-like enzymes 131 365 IPR011004 -
Bva12g02638 391 SMART SATase_N_2_a 130 234 IPR010493 GO:0005737|GO:0006535|GO:0009001
Bva12g02638 391 Pfam Serine acetyltransferase, N-terminal 130 234 IPR010493 GO:0005737|GO:0006535|GO:0009001
Bva12g02638 391 Gene3D Hexapeptide repeat proteins 264 386 - -
Bva12g02638 391 PANTHER SERINE ACETYLTRANSFERASE 80 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02638 Bva-Chr12 19437948 19439564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02638 130 379 Miscellaneous Gene Families AT2G17640 54.400 5.55e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02638 K00640 - gmx:100779106 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01113 12 10923224 10924727 Bva12g02638 12 19437948 19439564 BWGD
Bva12g02638 12 19437948 19439564 Bva12g02638 12 19437948 19439564 ECH