Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01113 ATGGCTACTTGTCTTGATGCTAATCCACTTTCCCGGAATCCAAACGGGTCCCAAACCGATGATTATTCTTGCAATTACACAAAATTCTGCAGACCTAGTTTTTGCTGCAACAATCGCGGGATGACGTTGCCTCCGTGTTCGGTTATCGAGGAAGAGGAAATTGATAAGGATGTGGAACAAGATCTGTGGCTGAAGATGCAAGACGAAGCTCAAAACGATGTTGATCAGGAGCCGCTTTTGTctacttattattttagttcaattttgTTTCACAAATCGTTAGAAGCTGCCTTGGCTAATCATCTGGGCATCAAATTGAGCAGTTCAAGTCTCCCCAGTGGGACCCTATTTGAGATTTTCTCAGGAATTTTCTCAGATGATGAAGAAATCATGGGGGCTGTGAAGGCTGATTTGAGAGCAGTGAAAGAAAGGGACCCTGCTTGCATAAGTTATGTCCACTGTTTCTTGAATTTCAAAGGGTTTCTAGCATGCCAAGCTCACAGGGCAGCTCACAAATTGTGGCTACAGGGCAGAAACGTTTTGGCCCTTTTGATTCAGAACAGGGTTTCTGAAGTTTTTGCAGTGGATATTCACCCTGGAGCTAAAATAGGACGTGGGTTTTTGCTTGATCACGCAACTGGGTTTGTGGTGGGAGAAACTGCAGTGATTGGGAACAATGTGTCAATTTTGCATAATGTGACATTGGGTGGAACTGGAAAGGTTTGTGGAGATAGGCACCCAAAGATTGGAGATGGGGTGCTGATAGGTGCAGGAACTTGTATTTTGGGCAATATAAAGATCGGTGATGGGGCAAAGATTGGTGCTGGTTCAGTGGTGCTCAAGGAAGTGCCTCCAAGGACTACTGCAGTTGGCAACCCAGCTAGATTGGTTGGGGGCAAGTTAAACAGGATTCCTAGCTTTACTATGGATCATACTTCACATATTAATGAATGGTCTGACTATGTTATCTA 971 0.4356 MATCLDANPLSRNPNGSQTDDYSCNYTKFCRPSFCCNNRGMTLPPCSVIEEEEIDKDVEQDLWLKMQDEAQNDVDQEPLLSTYYFSSILFHKSLEAALANHLGIKLSSSSLPSGTLFEIFSGIFSDDEEIMGAVKADLRAVKERDPACISYVHCFLNFKGFLACQAHRAAHKLWLQGRNVLALLIQNRVSEVFAVDIHPGAKIGRGFLLDHATGFVVGETAVIGNNVSILHNVTLGGTGKVCGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVLKEVPPRTTAVGNPARLVGGKLNRIPSFTMDHTSHINEWSDYVI 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01113 323 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 255 283 IPR018357 GO:0016740
Bva12g01113 323 SUPERFAMILY Trimeric LpxA-like enzymes 62 298 IPR011004 -
Bva12g01113 323 PANTHER SERINE ACETYLTRANSFERASE 1 323 - -
Bva12g01113 323 PANTHER SERINE ACETYLTRANSFERASE 1 323 - -
Bva12g01113 323 CDD LbH_SAT 193 293 IPR045304 -
Bva12g01113 323 SMART SATase_N_2_a 62 166 IPR010493 GO:0005737|GO:0006535|GO:0009001
Bva12g01113 323 Pfam Bacterial transferase hexapeptide (six repeats) 246 280 IPR001451 -
Bva12g01113 323 TIGRFAM cysE: serine O-acetyltransferase 134 295 IPR005881 GO:0005737|GO:0006535|GO:0009001
Bva12g01113 323 Gene3D serine acetyltransferase, domain 1 46 195 IPR042122 -
Bva12g01113 323 Pfam Serine acetyltransferase, N-terminal 62 166 IPR010493 GO:0005737|GO:0006535|GO:0009001
Bva12g01113 323 Gene3D Hexapeptide repeat proteins 196 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01113 Bva-Chr12 10923224 10924727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01113 62 311 Miscellaneous Gene Families AT2G17640 52.400 1.32e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01113 K00640 - jre:108985161 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01113 12 10923224 10924727 Bva12g02638 12 19437948 19439564 BWGD