Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02562 ATGGAAAATAAGGAAGAAAGCACCCCATTGCTGCAAAATCAATTTCCCATCAAAAGAACAGGGACGGTATGGACAGCAGTGGCACATATAGTGACAGGGGTGATTGGATCTGGAGTGCTATCATTGGCATGGAGCCTTGCGCAGCTTGGATGGGTTGCTGGGCCATTTGCGATTATACTCTTTGCTATCATTACGTTGGTCTCTGCTTATCTTCTCTGCAATAGCTATCGTTCTCCTGATCCAGAATATGGTCCGAGGAGGAGTTCCTCCTACCTTGATGCTGTTAATTTGCATTTAGGAGGAAACCATGGTTGGCTCAGTGGCTTTTGTGTGCATTTGAGCTTTTTTGGGTTCGGAATTGCCTACAATGTTACAACAGCTATTAGCATAAGGGCAATCCTAAAAGCAAACTGTTACCACAAAAACGGGCATGAAGCAGACTGTGAATTTGGAGGTGTATATTACATGCTGGTATTTGGGGTTGTCCAACTTTTTCTCTCACAGATACCCAACTTCCATAACATTGACTGGCTATCAGTTATTGCTGCAATTATGtcccttttttattctttcatagGAATGGGGCTTGCCATAGCTCAAGTCGTAGGAAATGGAATTATCAAGGGAAGCATCGAAGGAATCAGCACCACTACATATGAAAAAGTATGGCTGGTCGCTCAAGGGCTTGGTGACATAGCATTTTCCTATCCATTCGCTGTGATTCTTATAGAAATACAGGATACTTTGAAGTCACCTCCACCAGAAAACGTAACAATGAGGAAGGCCTCAACAATATCACTCTTCGTTACTACATTTTTCTATCTTTGTTGTGGATGCTCTGGATATGCTGCCTTTGGTGATAATACGCCGGGAAACCTATTAAACGGCTTCTATGAGCCTTATTGGCTTGTAGACTTCGCTAACGCTTGCATAGTGTTTCACCTCGTTGGCGCATATCAGGTGTATAGCCAGCCACTTTTTGCGAATGTTGAGAGTTGGTTGAGCTTTAGATTCCCAGAGTCTCAGTTTGTGAACCACATTTATACTCTGAAACTCCCTTTGCTTCCTGCTTTTGGAGTAAATCTGCTGAGGCTATGTTTCCGAAGTGCTTATGTGGCATCAACAACAATCATTGCAGTGACATTTCCATACTTCAATCAAGTTTTGGGAGTTCTGGGTGGCGTAATCTTTTGGCCATTGACCATATATTTTCCAGTGAAGATGTACATGAGTCAGTGCGATATCGAAGCCTGGACGACCAAGTGGATCTTGCTTCAGACTTTTAGCGCTTTTTGCTTTGTGGTGGGACTATTTGCATTGGTGGGATCCATTGAAGGAATAATAACCGCAAGATTGAGCTG 1361 0.4262 MENKEESTPLLQNQFPIKRTGTVWTAVAHIVTGVIGSGVLSLAWSLAQLGWVAGPFAIILFAIITLVSAYLLCNSYRSPDPEYGPRRSSSYLDAVNLHLGGNHGWLSGFCVHLSFFGFGIAYNVTTAISIRAILKANCYHKNGHEADCEFGGVYYMLVFGVVQLFLSQIPNFHNIDWLSVIAAIMSLFYSFIGMGLAIAQVVGNGIIKGSIEGISTTTYEKVWLVAQGLGDIAFSYPFAVILIEIQDTLKSPPPENVTMRKASTISLFVTTFFYLCCGCSGYAAFGDNTPGNLLNGFYEPYWLVDFANACIVFHLVGAYQVYSQPLFANVESWLSFRFPESQFVNHIYTLKLPLLPAFGVNLLRLCFRSAYVASTTIIAVTFPYFNQVLGVLGGVIFWPLTIYFPVKMYMSQCDIEAWTTKWILLQTFSAFCFVVGLFALVGSIEGIITARLS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02562 453 PANTHER OS05G0424000 PROTEIN-RELATED 17 452 - -
Bva12g02562 453 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 17 452 - -
Bva12g02562 453 Pfam Transmembrane amino acid transporter protein 19 448 IPR013057 -
Bva12g02562 453 Gene3D Amino acid/polyamine transporter I 17 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02562 Bva-Chr12 19088813 19092940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02562 17 448 Organic Solute Cotransporters AT5G09220 50.457 3.10e-163 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02562 K24917 - qsu:111994050 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01185 12 11259319 11265445 Bva12g02562 12 19088813 19092940 BWGD
Bva12g02562 12 19088813 19092940 Bva12g02562 12 19088813 19092940 ECH