Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01185 atggAGGACCAAGTAGTAACAGACCAATCGCCATTGATCAAAAGCCATTCTTCCGACGCTATTAACAAAACTGGGAACGTATGGAGTGCAGTGGCGCATATCATAACAGGTGTGATCGGAGCAGGGGTTCTCTCTCTTGCCTGGTCTATAGCACAGCTAGGGTGGATAGCAGGTCCATTGGTACTCATACTGTTCGCAATCACAACCCTTGTTTCATCTTTCCTTGTCTGTGATTGTTATAGATACCCTGATCCTGAATATGGGACTATCACCAACTCCTCTTTCATTAATGCTGTCAAACTATACTTAGgaGAGACAAAACAGAAGGTGTCTGGAGTTCTGGCCTATGTGGGCTTATTTGGTACCACAACAGCATATGTCATTACAACTGCCACCAGCGCCAAAGCTATTCTGAAATCAAACTGCTATCACAGGGAAGGCCACGAAGCTCCTTGTGATTATGGGGATACCCTGTTTATGGTGCTGTTTGGACTTGTTCAGATCTTTATGTCATTCATACCAGACCTCCACAACATGGCATGGGTTTCAGTTGTTGCAGCAATTATGTCCTTCACATACTCTTCTATTGGACTAGGACTTGGCGTTGCTCAAACCATAgAAAATGGGACAATAAAGGGGAGCGTAGTAGGAGTACCTGCCAGTAATATTGCTGACAAATTATGGTTAGTCTTCCAAGCGCTTGGTGACATCGCCTTTGCCTATCcatattcaattattcttcTGGAGATACAGAATACTCTGGAGTCTCCTCCACCAGAAAACCAGACCATGAAGAAGGCTTCGATGATGGCAATCTTTATTACAACATTCTTCTATCTTTGCTGTGGATGCTTCGGATATGCTGCCTTTGGAGATGCCACACCAGGAAACCTTTTGACAGGGTTTGGGTTTTATGAGCCTTACTGGCTCATTGACTTTGCTAATGCTTGCATCATTCTTCATTTGGTGGGAGGATATCAGATTTACAGTCAGCCAATATATAGTTTTGCGGATAGATGGTGTTCGAGGAAATTCCCCAACAGTGAATTTGTGAACAAATTCTACTCCTTGAAGCTGCCACTGCTGCCAGGTTTTCAGTTGAATCTTTTCAGGCTATGTTTCAGAACTGCCTACGTGATTTCAACCACTGGAATTGCCATCTTGTTTCCTTACTTCAACCAAGTTCTAGGAGTGTTAGGTGCCTTAAACTTTTGGCCATTGACCATATATTTCCCAGTAGAGATGTATTTTGTacagaagaaaattcaacCTTGGACTAGAAAATGGATTGTCTTAAGGACCTTTAGCTTTGTTTGCTTTCTTGTGACAGTAGTGAGCCTCATCGGTTCAATTGAAGGAATTATAAGCGCAAAACTTAGCTG 1382 0.4182 MEDQVVTDQSPLIKSHSSDAINKTGNVWSAVAHIITGVIGAGVLSLAWSIAQLGWIAGPLVLILFAITTLVSSFLVCDCYRYPDPEYGTITNSSFINAVKLYLGETKQKVSGVLAYVGLFGTTTAYVITTATSAKAILKSNCYHREGHEAPCDYGDTLFMVLFGLVQIFMSFIPDLHNMAWVSVVAAIMSFTYSSIGLGLGVAQTIENGTIKGSVVGVPASNIADKLWLVFQALGDIAFAYPYSIILLEIQNTLESPPPENQTMKKASMMAIFITTFFYLCCGCFGYAAFGDATPGNLLTGFGFYEPYWLIDFANACIILHLVGGYQIYSQPIYSFADRWCSRKFPNSEFVNKFYSLKLPLLPGFQLNLFRLCFRTAYVISTTGIAILFPYFNQVLGVLGALNFWPLTIYFPVEMYFVQKKIQPWTRKWIVLRTFSFVCFLVTVVSLIGSIEGIISAKLS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01185 460 Pfam Transmembrane amino acid transporter protein 24 455 IPR013057 -
Bva12g01185 460 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 15 459 - -
Bva12g01185 460 PANTHER OS05G0424000 PROTEIN-RELATED 15 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01185 Bva-Chr12 11259319 11265445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01185 10 455 Organic Solute Cotransporters AT5G09220 49.111 8.57e-173 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01185 K24917 - qsu:111993391 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01185 12 11259319 11265445 Bva12g02562 12 19088813 19092940 BWGD