Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02184 ATGGCAAAACTACAAGATTCTCTCGTTAGAAGCTCTAGGCACAGCTGCATTACCTCTCTCTCGTTTTCGCCGCCGAGCCTATATAACAAGAGAATGGCTGCTGAAGTTTATCGACAGGCTGTTGGGACTCTTCAGTTGCATTCGCATCGTAATAGTTCTAATCATCCTCAAAGGCATCGAAGTAGTTTGGTCAGGTTGGTAACAAAGGATTTCATCAGCTGTAATGGCCTGTCCAGGGGAGGATGTAATCACCCTGGCAAGAGGAGTAGTACTGTAATTCAATCTTCAGCTTCTCAATCTTCTGTGGCTGATCCAGTGTCATCCCCCTTAAAAGGCCAAAAAAGTGACAATCCCAAGAAATCAAATGAAGCTGCCCTGATCCTCATACGGCATGGCGAGTCATTATGGAATGAAAAGAACTTGTTCACAGGTTGTGTCGATGTCCCACTAAGTAAGAGGGGTATAGAAGAGGCAATTGAAGCTGGCAAGAGAATTGACAGCATTCCTGTGGATGTCATATTTACATCTGCTCTGATTCGTGCGCAAATGACAGCCATGCTTGCCATGACCCAGCACCGTCGTAGGAAGGTTCCTGTCGTTTTACACAACGAGAGTGAACAGGCAAGGGCATGGAGTCAAATTTTTAGCGAAGATACAAAGAAACAATCCATTCCAGTCATAGCTGCTTGGCAACTAAATGAAAGAATGTATGGGGAGCTACAGGGTCTGAATAAGCAGGAAACAGCAGATAGATATGGGAAAGAACAAGTCCACGAGTGGCGCCGAAGTTATGACACACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGAGCAGTTGCCTATTTCAGAGACCAGATTGAACCTCAGCTTTCATCTGGAAAGAATGTTATGATTTCTGCCCATGGGAATTCATTGAGATCCATTATCATGTATCTCGACAAATTAACTTCCCAAGAGgtCATAAGTTTAGAATTGTCAACTGGAATTCCCatgctttatattttcaaagagGGAAAATTCATTAGGAGGGGGAGCCCCATAGGACCAACCGAAGCTGGAGTTTATGCCTTTACAAAGAGTCTTGCTCTTTACCGACAGAAGTTGGACGAGATGATCCAATA 1130 0.4345 MAKLQDSLVRSSRHSCITSLSFSPPSLYNKRMAAEVYRQAVGTLQLHSHRNSSNHPQRHRSSLVRLVTKDFISCNGLSRGGCNHPGKRSSTVIQSSASQSSVADPVSSPLKGQKSDNPKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKRGIEEAIEAGKRIDSIPVDVIFTSALIRAQMTAMLAMTQHRRRKVPVVLHNESEQARAWSQIFSEDTKKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDTPPPNGESLEMCAERAVAYFRDQIEPQLSSGKNVMISAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGKFIRRGSPIGPTEAGVYAFTKSLALYRQKLDEMIQ 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02184 376 SMART PGAM_5 125 311 IPR013078 -
Bva12g02184 376 CDD HP_PGM_like 126 341 IPR013078 -
Bva12g02184 376 MobiDBLite consensus disorder prediction 84 115 - -
Bva12g02184 376 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 123 350 IPR005952 GO:0004619|GO:0006096|GO:0016868
Bva12g02184 376 SUPERFAMILY Phosphoglycerate mutase-like 126 342 IPR029033 -
Bva12g02184 376 MobiDBLite consensus disorder prediction 82 120 - -
Bva12g02184 376 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 21 375 - -
Bva12g02184 376 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 128 137 IPR001345 GO:0003824
Bva12g02184 376 Gene3D - 116 348 IPR029033 -
Bva12g02184 376 PANTHER PHOSPHOGLYCERATE MUTASE 21 375 IPR005952 GO:0004619|GO:0006096|GO:0016868
Bva12g02184 376 Pfam Histidine phosphatase superfamily (branch 1) 214 329 IPR013078 -
Bva12g02184 376 Pfam Histidine phosphatase superfamily (branch 1) 126 201 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02184 Bva-Chr12 16844599 16848565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02184 K01834 - gmx:100802621 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02184 12 16844599 16848565 Bva06g02747 06 17282394 17286039 BWGD
Bva12g02184 12 16844599 16848565 Bva12g02184 12 16844599 16848565 ECH