Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02747 ATGATGGAGATGGAGTTTGGTAGTCTTAAATTCATTTCAAGCTTTGAAGATTCTCTCGTAATAAGCTTTAGGCACAGCAACATTACCTTTGCCTCGTTTCCGTCGCCGACACTATATAACCAGAGAATGGCTGCTGAAGTGTATCGACAGGCTATTGGAAATCTTCAGTTGCATCCGCAACTTAATAGTTCTAATCATCCCCAGAAGCTTCGAAATAGTTCAGTAAGGTTGGTGGCAAAGGATTTTATCAGCAGTAATTGCCTGTCAAGGGGAGGATGTAATCACCCTGGGCAGAGGAATTATAGTGCAATTCGATCTTCAGCTTCACAAACTTCGGTGGCTGATCCAGTGTCGGCTCCTTTGAAAGGCAACAAAAGTGGCACCCACAAGAAATCAAATGAAGCAGCCCTGATCCTCATACGGCATGGCGAGTCACTATGGAATGAGAAGAACTTATTTACAGGTTGTGTTGATGTCCCACTAAGCAAGAGGGGTATAGACGAGGCAATTGAAGCTGGCAAGAGAATCAGCAGCATTCCTGTGGATGTCATATTTACATCTGCTCTGATTCGTGCACAAATGACAGCCATGCTTGCCATGACCCAGCACCGTCGTAAGAAGGTTCCTATCGTTATACACAGTGAGAGTGAACGGGCAAGGGCATGGAGTCAAGTTTTTAGCGAAGATACAAAGAAGCAATCCGTTCCAGTCATAGCTGCTTGGCAACTAAATGAAAGAATGTATGGGGAACTACAGGGTCTTAATAAGCAGGAAACAGCTGACAGATATGGTAAAGAACAAGTCCACGAGTGGCGCCGAAGTTATGACACACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCCGACAGAGCAGTTGCCTATTTCAGAGACCAAATTGAACCTCAGCTTTCATCTGGAAAGAATGTTATGATTGCTGCACATGGGAACTCACTGAGATCCATTATCATGTATCTCGACAAATTAACTTCCCAAGAGGTCATTAGTTTAGAATTGTCAACTGGAATTCCCatgctttatattttcaaagagGGGAAATTCATTAGGAGGGGGAGCCCCATAGGACCAACTGAAGCTGGAGTTTATGCCTATACAAAGAGTCTGGCTCTTTACCGGCAGAAGTTGGATGAGATGGTCCAGTA 1163 0.4368 MMEMEFGSLKFISSFEDSLVISFRHSNITFASFPSPTLYNQRMAAEVYRQAIGNLQLHPQLNSSNHPQKLRNSSVRLVAKDFISSNCLSRGGCNHPGQRNYSAIRSSASQTSVADPVSAPLKGNKSGTHKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKRGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRKKVPIVIHSESERARAWSQVFSEDTKKQSVPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDTPPPNGESLEMCADRAVAYFRDQIEPQLSSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGKFIRRGSPIGPTEAGVYAYTKSLALYRQKLDEMVQ 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02747 387 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 28 386 - -
Bva06g02747 387 Gene3D - 124 212 IPR029033 -
Bva06g02747 387 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 134 361 IPR005952 GO:0004619|GO:0006096|GO:0016868
Bva06g02747 387 SUPERFAMILY Phosphoglycerate mutase-like 137 353 IPR029033 -
Bva06g02747 387 PANTHER PHOSPHOGLYCERATE MUTASE 28 386 IPR005952 GO:0004619|GO:0006096|GO:0016868
Bva06g02747 387 Gene3D - 213 366 IPR029033 -
Bva06g02747 387 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 139 148 IPR001345 GO:0003824
Bva06g02747 387 SMART PGAM_5 136 322 IPR013078 -
Bva06g02747 387 CDD HP_PGM_like 137 352 IPR013078 -
Bva06g02747 387 Pfam Histidine phosphatase superfamily (branch 1) 204 340 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02747 Bva-Chr6 17282394 17286039 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02747 K01834 - gmx:100802621 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02184 12 16844599 16848565 Bva06g02747 06 17282394 17286039 BWGD
Bva06g02747 06 17282394 17286039 Bva06g02747 06 17282394 17286039 ECH