Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01916 ATGGAGAGTAAGGAAAACCATGGAGTTGGCTATGAGGAGGAGGTTATTGAAGAGTGTCAAATTAAAGAAGTGGACCTCGTTGTGCCCAAAACAGATGACCCCACCATGCCTTATCTCACATTCAGAATGTGGGTACTTGGACTTTTTTCTTGTATCCTGCTAGCCTTTGTGAACCAATTCTTCTGGTACAGAACAAACCCTCTGTCCATCTCTTCGATTTCTGCTCAGATTGTCGTGGTTCCAATTGGTCATTTTATGGCAAGGACATTACCAGATCATGTCCTCTTTAAGGGTACATTTATGGAATTCTCATTGAACCCAGGGCCTTTCAACATTAAGGAACATGTTCTGATAACTATCTTTGCCAATTCGGGTGCCGGCTCTGTCTATGCTACTCATATTTTGAGTGCAGTTAAGCTCATGTACAGAAGAAGTCTCCCTTTCCTTCCAGCATTCATTGTTATGCTCACCTCTCAGGTACTGGGATTTGGTTGGGCAGGACTGTTCCGAAAATTTCTGGTTGAGCCAAGCGAAATGTGGTGGCCTTCTAATCTGGTTCAGGTCTCACTTTTCACGGCTCTAAATGAGAAGTCAAAGAGATCAAAAGGCAGCACAAGCCGGATGCAATTTTTCCTCCTTGTCATGACCAGTAGCTTTGCGTACTATCTCCTCCCAGGCTATGCTTTCACATTATTGACATCTTTCTCTTGGGTGTGTTGGCTTGCACCCAATTCAGTCCTGATCAACCAACTAGGTTCTGGCAGGAAAGGTCTTGGAATTGGTTCATTTGGGCTTGATTGGTCTACAATGTCTTCTTACCTTGGCAGTCCATTAGCTAGCCCATGGTTTGCTACTGTTAACATTGCTGCTGGGTTCTTCCTTGTTATGTATGTGATAACACCCATTTGTTACTGGAATAATGTCTATGATGCCCAGACCTTTCCGATATTTTCAAGTAAGCTTTTCACGGAAAAAGGTTCACCATACAACATTGCAAGAATAGTTGATTCCGATTTCCATCTTGACCATGATGCTTACTCAAAGATTGGACCTGTGCATCTCAGCACCTTCTTTGCAATGACATATGGTCTTGGATTCGCTACACTTTCTGCTACTATTGTGCATGTTATACTCTTCAATGGAAGGGAAATAGTGATGCAAAGCAAAAGGGCTTTTGGATCCAGTAGAAGATTGGACAGACACACAAAACTTATGCAGAAGTACAAATCAGTACCCGGTTGGTGGTTTCTTGTCATCCTCGTGGGGAACAttactcttattatttttgcttgtGAATACTACAACGATTCACTTCAGTTGCGTTGGTGGGGTGTATTATTAGCTTGTGCAATTTCTGTTTTGTTCACTCTTCCAATTGGCATAATTGCAGCCACTACAAATCAGGCACCAGGTTTGAATATTTTGACAGAATATATCATTGGTTATGTGTATCCAGAACGCCCTGTAGCAAACATGTGCTTTAAGGTGTACGGATACATTAGCATGACTCAAGGACTAACCTTCTTGGCAGACTTTAAACTGGGTCACTATATGAAGATTCCACCAAGAGCAATGTTCATGGCACAGGTTCTGGGAACAGTGGTATCTGTATTAGTATACACCTTAACTGCATGGTGGCTGATGTCAACAATCCCCAACCTTTGTGATATATCCGTACTACCAGAGGATAGCCCTTGGCAATGCCCAATGGACCGTGTATTCTTTGATGCTTCTGTTATTTGGGGCCTTGTTGGTCCTCGCAGAATCTTTGGAGATCTTGGCAAATATGCCAGAGTGAATTGGTTCTTCCTTGCTGGAGCCGTTGCTCCagttttggtttggtttgctCACAAGGCATTCCCAACTCAAATGTGGATACGTTACATTCACATGCCCGTGATGTTGGGAGCTACGGCCATGATGCCTCCTGCAACTTCAGTCAACTTCATCAGTTGGTTAATTCTTGCATATCTCTTTGGTTATGTTGTCTATACATACAAGCAAGAATGGTGGTCTAAATACAATTATGTTGTATCTGCTGGACTTGATGCTGGAACTGCCTTCATGACAATCTTGTTGTTCATTGCTTTGGGATCTAATGACATTACCATTCAGTGGTGGGGAAACGAAAGTGAAGGTTGCCCCTTGGCTTCTTGCCCTATTGCCAAAGGCATTGTTGCTCGAGGTTGCCcagtttttaatta 2204 0.422 MESKENHGVGYEEEVIEECQIKEVDLVVPKTDDPTMPYLTFRMWVLGLFSCILLAFVNQFFWYRTNPLSISSISAQIVVVPIGHFMARTLPDHVLFKGTFMEFSLNPGPFNIKEHVLITIFANSGAGSVYATHILSAVKLMYRRSLPFLPAFIVMLTSQVLGFGWAGLFRKFLVEPSEMWWPSNLVQVSLFTALNEKSKRSKGSTSRMQFFLLVMTSSFAYYLLPGYAFTLLTSFSWVCWLAPNSVLINQLGSGRKGLGIGSFGLDWSTMSSYLGSPLASPWFATVNIAAGFFLVMYVITPICYWNNVYDAQTFPIFSSKLFTEKGSPYNIARIVDSDFHLDHDAYSKIGPVHLSTFFAMTYGLGFATLSATIVHVILFNGREIVMQSKRAFGSSRRLDRHTKLMQKYKSVPGWWFLVILVGNITLIIFACEYYNDSLQLRWWGVLLACAISVLFTLPIGIIAATTNQAPGLNILTEYIIGYVYPERPVANMCFKVYGYISMTQGLTFLADFKLGHYMKIPPRAMFMAQVLGTVVSVLVYTLTAWWLMSTIPNLCDISVLPEDSPWQCPMDRVFFDASVIWGLVGPRRIFGDLGKYARVNWFFLAGAVAPVLVWFAHKAFPTQMWIRYIHMPVMLGATAMMPPATSVNFISWLILAYLFGYVVYTYKQEWWSKYNYVVSAGLDAGTAFMTILLFIALGSNDITIQWWGNESEGCPLASCPIAKGIVARGCPVFN 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01916 734 PANTHER ISP4 LIKE PROTEIN 12 733 IPR004648 GO:0055085
Bva12g01916 734 Pfam OPT oligopeptide transporter protein 39 696 IPR004813 GO:0035673
Bva12g01916 734 PANTHER OLIGOPEPTIDE TRANSPORTER 6 12 733 - -
Bva12g01916 734 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 23 698 IPR004813 GO:0035673
Bva12g01916 734 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 21 701 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01916 Bva-Chr12 15315099 15318275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01916 13 733 Organic Solute Cotransporters AT4G27730 69.613 0.0 1089
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01916 - - gmx:100817739 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01916 12 15315099 15318275 Bva06g03004 06 18689427 18693429 ECH
Bva12g01916 12 15315099 15318275 Bva12g01916 12 15315099 15318275 ECH