Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03004 ATGGCTTCTGAGGTTTTTGAGGTTGAGCAGAAGAGTGCCTCTGACTATGAGGACGTGAATGAAGACTGCCCAATCAAACAAGTAGATCTCACGGTGCCAAAAACTGATGACCCCAACATGCCTCTGCTTACGTTCAGAATGTGGGTTCTGGGtattgtttcttgtgtcattcTCTCCTTTGTGAACCAGTTCTTTTGGTACAGGACACAGCCTTTGAGTGTCTCTTCAATTTCTGCTCAAATTGCTGTGGTTCCAATTGGCCATTTCATGGCGAAGACGTTGCCAAACCGTGTCTTCTTCAAGGATACACGGTTTGAATTCTCGCTGAACCCAGGGCCCTTCAATATTAAGGAGCATGTCCTTATCACTATCTTTGCCAATTCTGGTGCGGGAACCGTCTATGCTACCCATATTCTAAGTGCAGTTAAGCTCATCTACAAGAGAAAGCTCACTCTTCTTCCAGCCTTCCTGGTTATGCTTACCACTCAGGTACTGGGTTTTGGTTGGGCAGGAATGTTTAGGAAGTTTCTGGTTGAACCAGGGGAAATGTGGTGGCCTTCTAATCTGGTTCAAGTCTCACTATTCACGGCTCTTCATGAAAAGTCAAAAAGGCCTAAAGGGGGCACAACTCGTACACAGTTTTTCCTTCTGGTTTTGATCTCAGGATTTGCTTACTATGTCCTTCCAGGctatctcttttttatgttgACATCTTTCTCTTGGGTCTGTTGGGCTGCTCCTAGTCCATTAGCTAGCCCGTGGTTTGCCACTGCTAATATTGCGGTTGGATTCTTTCTTGTTATGTATGTTATGACTCCCCTAGCATACTGGAATAATGCCTATAACGCCAAGAACTTTCCTATATATTCAACTTATTCAGAGATTGGACCTGTGCATCTTAGCACCTTCTTTGCAATGACATATGGTCTTGGATTTGCTACACTTTCTGCTACTATTATGCATGTTCTACTCTTCAATGGAAGAGAAATATGGAACCAAAGCAAAAGGGCCTTTGGAGGCACCAAGAAAATGGACATCCACACAAGACTTATGAAGAGATACAAGTCAGTGCCCACGTGGTGGTTCGTTATCATCCTTGTGCTAAACATTgctcttattatttttgcttgtGAATACTACAAAGAATCACTTCAACTGCCATGGTGGGGTGTGTTACTAGCTTGTGCGATTTCCGTCGGGTTCACTCTTCCTATTGGTATAATTTCAGCTACTACGAATCAGCAACCAGGTTTAAACATCATCACAGAGTACATCATTGGTTATATGTATCCTGAGCGCCCCGTTGCTAACATGTGCTTCAAGGTTTATGGCTATATTAGTATGACCCAAGCACTGACCTTTTTGGCAGACTTTAAATTGGGTCACTATATGAAGATTCCACCAAGAACAATGTTCATGGCACAGGTCGTAGGAACAATCGTGGCAGTAATTGTATACACAGTGACAGCATGGTGGCTGATGGAAGCAATCCCAAACCTTTGTGATACGAACGTACTACCAGAAGATAGTCCTTGGCAATGCCCAATGGATCGTGTATTTTTTGATGCATCTGTTATTTGGGGTCTTGTTGGTCCACGCAGAATCTTTGGGGATCTTGGTGAATACCCCAAAGTCAATTGGTTCTTTCTTGGTGGAGCTATTGCTCCTCTTTTAGTTTGGATGTCTCAAAAGGCATTCCCAAGTCAAGAATGGATCCGTCTAATCCACATGCCCGTGTTGCTGGGTGCTACTTCTATGATGCCTCCTGCAAGTGCAGTCAACTTCACTAGCTGGTTAATTTGTGGATTTCTCTCTGGATTCGTTGTATATAGATACAGACCAGAATGGTGGAAGCGCTACAATTATGTTCTCTCTGGTGGTCTTGATGCTGGAACTGCCTTCATGACAATCTTATTGTTCGTTGCTCTGGGATATAACAACATTAGCCTTACCTGGTGGGGAAACAATGGAGAAGGCTGCCCCATGGTTTCTTGCCCTACTGCCAAAGGCATTGTTGGTGGTCATGGTTGCCCTCTTAATTG 2042 0.4295 MASEVFEVEQKSASDYEDVNEDCPIKQVDLTVPKTDDPNMPLLTFRMWVLGIVSCVILSFVNQFFWYRTQPLSVSSISAQIAVVPIGHFMAKTLPNRVFFKDTRFEFSLNPGPFNIKEHVLITIFANSGAGTVYATHILSAVKLIYKRKLTLLPAFLVMLTTQVLGFGWAGMFRKFLVEPGEMWWPSNLVQVSLFTALHEKSKRPKGGTTRTQFFLLVLISGFAYYVLPGYLFFMLTSFSWVCWAAPSPLASPWFATANIAVGFFLVMYVMTPLAYWNNAYNAKNFPIYSTYSEIGPVHLSTFFAMTYGLGFATLSATIMHVLLFNGREIWNQSKRAFGGTKKMDIHTRLMKRYKSVPTWWFVIILVLNIALIIFACEYYKESLQLPWWGVLLACAISVGFTLPIGIISATTNQQPGLNIITEYIIGYMYPERPVANMCFKVYGYISMTQALTFLADFKLGHYMKIPPRTMFMAQVVGTIVAVIVYTVTAWWLMEAIPNLCDTNVLPEDSPWQCPMDRVFFDASVIWGLVGPRRIFGDLGEYPKVNWFFLGGAIAPLLVWMSQKAFPSQEWIRLIHMPVLLGATSMMPPASAVNFTSWLICGFLSGFVVYRYRPEWWKRYNYVLSGGLDAGTAFMTILLFVALGYNNISLTWWGNNGEGCPMVSCPTAKGIVGGHGCPLN 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03004 680 PANTHER ISP4 LIKE PROTEIN 9 247 IPR004648 GO:0055085
Bva06g03004 680 PANTHER OLIGOPEPTIDE TRANSPORTER 6 290 679 - -
Bva06g03004 680 PANTHER OLIGOPEPTIDE TRANSPORTER 6 248 291 - -
Bva06g03004 680 PANTHER OLIGOPEPTIDE TRANSPORTER 6 9 247 - -
Bva06g03004 680 PANTHER ISP4 LIKE PROTEIN 290 679 IPR004648 GO:0055085
Bva06g03004 680 PANTHER ISP4 LIKE PROTEIN 248 291 IPR004648 GO:0055085
Bva06g03004 680 Pfam OPT oligopeptide transporter protein 43 642 IPR004813 GO:0035673
Bva06g03004 680 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 28 645 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03004 Bva-Chr6 18689427 18693429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03004 7 679 Organic Solute Cotransporters AT4G27730 64.986 0.0 996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03004 - - jre:108989594 1119.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01916 12 15315099 15318275 Bva06g03004 06 18689427 18693429 ECH
Bva06g03004 06 18689427 18693429 Bva06g03004 06 18689427 18693429 ECH