Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01913 ATGGAGTTATTCTACTACCTCGTGTTCGGAGGCTTGGGCGCTGTGGTGGCAGCTGTCGAGTTCAGCAAGACCAACAAGGATCGCATCAACACCTCTTCAGCTTTCAATTCCTTCAAGAACAATTACCTTGTCGTTTATTCGCTCATGATGGCTGGAGATTGGTTGCAAGGTCCATACGTCTATTACCTTTACACTACTTATGGTTACAGTAAAGGGGAGATAGGACAGCTTTTCATTGCTGGTTTTGGGTCATCCATGTTGTTTGGAACAATCGTGGGATCACTAGCTGACAAACAGGGGCGGAAGAGAGCCTGTGTGACTTACTGCATAACCTACATTCTGAGCTGCATTACCAAACACTCTCCACAGTACAAAATCTTGATGTTGGGCCGTGTTCTGGGAGGCATAGCTACTTCGCTCCTGTTTTCAGCATTTGAGTCGTGGCTTGTTGCTGAACACAACAAGAGGGGCTTTGAACAACAATGGTTATCGATAACATTCTCAAAGGCAATATTTCTTGGCAATGGTCTTGTTGCTATTTTGTCTGGGTTGTTTGGAAATGTCCTTGTGGATACTTTGTCTCTTGGACCTGTTGCTCCCTTTGATGCTGCTGCATGTTTCCTTGCAATTGGTATGGCCATCATATTGTCATCATGGTCAGAAAATTATGGGGATCCTTCTGAGAGCAAGGACTTACTTACCCAATTTAGGGGTGCTGCTGTGGCCATTGCATCTGATGAAAAAATTGCCTTGCTAGGAGCCATACAGTCTCTCTTTGAAGGTTCAATGTATACCTTCGTGTTCCTATGGACTCCTGCTTTGAGCCCAAATGATGAAGAGATTCCCcatggttttatttttgcaacaTTCATGTTAGCTTCAATGTTGGGAAGCTCACTTGCATCTAGGTTAATGGCCCGCACCACATCCAGAGTAGAGAGCTACATGCAGATTGTTTTTGCAGTCTCTTCTGCCTCTCTGCTTCTTCCCATTCTGACCAGTATATTGGTAGCTCCTTCTAAAGAAAAAGGTGGAAGCATCTCTTTCTCCGGTTGCATTCAGCTTCTTGGCTTCTGTACTTTTGAGGCATGTGTAGGCATATTCTGGCCATCCATTATGAAGATGAGATCTCAATACGTTCCTGAGGAGGCTAGAAGTACCATCATGAACTTTTTCCGCATCCCTCTGAACATTTTCGTCTGTGTTGTGCTGTACAATGTTAATGCATTCCCTATCACTGTTATGTTTGGCATGTgctcaattttccttttcgtGGCATGTATCTTGCAAAGGCGGTTAATGGTGATTGCAGATAAACCAAAACTAGAAGATTGGGCAATGAAGGAAAGAGACAACGAGTCAGAACCACTGAACATTTA 1379 0.4293 MELFYYLVFGGLGAVVAAVEFSKTNKDRINTSSAFNSFKNNYLVVYSLMMAGDWLQGPYVYYLYTTYGYSKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKILMLGRVLGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNVLVDTLSLGPVAPFDAAACFLAIGMAIILSSWSENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARTTSRVESYMQIVFAVSSASLLLPILTSILVAPSKEKGGSISFSGCIQLLGFCTFEACVGIFWPSIMKMRSQYVPEEARSTIMNFFRIPLNIFVCVVLYNVNAFPITVMFGMCSIFLFVACILQRRLMVIADKPKLEDWAMKERDNESEPLNI 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01913 459 Pfam Sugar-tranasporters, 12 TM 4 358 IPR008509 GO:0015098|GO:0015689|GO:0016021
Bva12g01913 459 PANTHER SAM (S-ADENOSYL METHIONINE) TRANSPORTER 1 459 IPR008509 GO:0015098|GO:0015689|GO:0016021
Bva12g01913 459 PANTHER MOLYBDATE-ANION TRANSPORTER 1 459 - -
Bva12g01913 459 SUPERFAMILY MFS general substrate transporter 43 444 IPR036259 -
Bva12g01913 459 CDD MFS_MFSD5_like 35 431 - -
Bva12g01913 459 Gene3D MFS general substrate transporter like domains 42 431 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01913 Bva-Chr12 15292561 15297484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01913 K24175 - zju:107408153 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01913 12 15292561 15297484 Bva06g03008 06 18708217 18713106 ECH
Bva12g01913 12 15292561 15297484 Bva12g01913 12 15292561 15297484 ECH