Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03008 ATGGAGTTATTCTACTACCTCGTGTTCGGAGGATTGGGCGCGGTGGTGGCAGCTGTCGAGTTCAGCAAGACCAAAAATGATCGCATCAACACCTCTGCAGCTTTTAACTCCTTCAAGAACAATTACCTCATCGTTTATTCGCTCATGATGGCTGGAGATTGGTTGCAAGGTCCATATGTCTATTACCTTTACACTACTTATGGATACTCGAAAGGGGAGATTGGACAACTTTTCATTGCTGGCTTTGGGTCATCCATGTTGTTTGGAACAATCGTTGGATCACTAGCTGACAAACAGGGACGGAAGAGAGCTTGTGTGACTTACTGTATAACCTACATTCTTAGCTGCATTACCAAACACTCTCCACAGTACAAAATCTTGATGTTGGGCCGTGTTTTGGGAGGTATAGCTACTTCGCTCCTGTTTTCAGCATTTGAGTCATGGCTTGTTGCCGAACACAACAAGAGAGGCTTTGAACAACAATGGTTATCTATAACATTCTCAAAGGCGATATTTCTTGGCAATGGTCTTGTTGCTATTGTGTCTGGGTTGTTTGGAAATGTCCTTGTGGATACTTTGGCTCTTGGACCTGTTGCTCCCTTTGATGCTGCTGCATGCTTTCTTGCAATTGGTATGGCCATTATATTGTCATCATGGTCAGAAAATTTTGGGGATCCTTCTGAGAGCAAGGATTTACTCACCCAATTTAGGGGAGCTGCTGTGGCCATTGCATCTGATGAAAAAATTGCCTTGCTAGGTGCCATACAGTCTCTCTTTGAAGGTTCAATGTATACCTTTGTGTTCCTATGGACTCCTGCTTTGAGCCCAAATGATGAAGATATTCCCcatggttttatttttgcaacaTTCATGTTAGCTTCAATGTTGGGAAGCTCACTTGCATCTCGGTTAATGGCCCGCACATCAACCAGAGTAGAGAGCTACATGCAGATTGTTTTTGCAATCTCGTCTGCCTCTCTACTTCTTCCTATTCTGACCAATATACTTGTAGCTCCTTCTAAAGAAAAGGGTGGAAGCATCTCATTTTCAGGCTGCATTCAGCTTCTTGGCTTCTGTACGTTTGAGGCATGTGTAGGCATATTCTGGCCATCCATTATGAAGATGAGATCTCAATACGTTCCTGAGGAGGCCAGAAGCACCATCATGAACTTTTTCCGCATCCCTCTGAACATTTTCGTCTGTGTTGTCCTGTACAATGTTAATGCATTCCCTATCACTGTTATGTTTGGCATGTgctcaattttccttttcatggcATCTATCTTGCAGAGGCGGTTGATGGTTATCGCAGATAAACCAAaaacagaagaCTGGGCAATGAAGGAAAGGGACACCGAGTCAGAACCACTAAACTTGTA 1379 0.4213 MELFYYLVFGGLGAVVAAVEFSKTKNDRINTSAAFNSFKNNYLIVYSLMMAGDWLQGPYVYYLYTTYGYSKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKILMLGRVLGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAIVSGLFGNVLVDTLALGPVAPFDAAACFLAIGMAIILSSWSENFGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEDIPHGFIFATFMLASMLGSSLASRLMARTSTRVESYMQIVFAISSASLLLPILTNILVAPSKEKGGSISFSGCIQLLGFCTFEACVGIFWPSIMKMRSQYVPEEARSTIMNFFRIPLNIFVCVVLYNVNAFPITVMFGMCSIFLFMASILQRRLMVIADKPKTEDWAMKERDTESEPLNL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03008 459 Pfam Sugar-tranasporters, 12 TM 4 358 IPR008509 GO:0015098|GO:0015689|GO:0016021
Bva06g03008 459 PANTHER MOLYBDATE-ANION TRANSPORTER 1 458 - -
Bva06g03008 459 Gene3D MFS general substrate transporter like domains 42 431 IPR036259 -
Bva06g03008 459 CDD MFS_MFSD5_like 35 431 - -
Bva06g03008 459 PANTHER SAM (S-ADENOSYL METHIONINE) TRANSPORTER 1 458 IPR008509 GO:0015098|GO:0015689|GO:0016021
Bva06g03008 459 SUPERFAMILY MFS general substrate transporter 43 435 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03008 Bva-Chr6 18708217 18713106 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03008 K24175 - zju:107408105 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01913 12 15292561 15297484 Bva06g03008 06 18708217 18713106 ECH
Bva06g03008 06 18708217 18713106 Bva06g03008 06 18708217 18713106 ECH