Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01909 ATGAATTCGGAGACCCATTTTGTTGATCACGGGATTCTCTTCCCATCTTCAGTTCCCTCGTTAATACATACTTTAATCCAATTCCAAGACCCAATTTTGGCTTTCTGCACTTCTCTTTCGTACCTCCTGGGTGTTTGTGTCAGTCAGCTCTGTAAGGAGGCCCACTCGGTTGTGGCTGGGTTTTCACTGCATTTGGAGAAGAATCAAGTATATAATAGTTTTGAGCTCAAAGTGGTCGTTAGAAAGCTTCAAACGGAAAGGAAGTTGAGGTTAGACGATTCAGTGATTACAATGGGGCATATAACCAATGAAGAGCTGAAAGAGATTGAGAATTTTGAGAGAGAGGACAAGGAAGAGATTCGAGTTGAGCCAGAGGACTTGAGTAGAATAGCACCATGGACAAAACAGATCACAATTCGAGGACTAATAGCTAGCTTACTGATTGGAACCATTTACAGTGTGATAGTAATGAAGCTGAACCTCACAACTGGGCTAGTCCCCAATCTCAATGTCTCAGCTGCTCTCCTTGGCTTTGTGTTCATCAGAACTTGGACTAAGCTGCTTGAGAAGGCTAAAATTGTTTCTACACCATTCACTCGGCAGGAGAATACTATAATCCAGACTTGTGCAGTTGCTTGCTACAGCATAGCAGTAGGAGGTGGTTTTGGGTCCTACCTCTTGGGTTTGAATAACAGGACCTATCAGCAAGCTGGGGTTGATACACAGGGGAATACTCCTGGGAGCACGAAGGAACCTGGAATTGGTTGGATGACAGGTTTTCTCTTCGTCACAAGCTTTGTTGGGCTGTTGGCATTGGTTCCTCTCAGAAAGATCATGATAATAGACTACAAATTGACCTATCCAAGTGGAACTGCTACTGCTGTTCTTATTAATGGATTCCATACTCCTAAAGGAGACAAGATGGCCAAGAAGCAGGTTCACGGTTTCAtgaaattcttttcatttagTTTCGTTTGGGCTTTCTTTCAATGGTTCTATACCGGCGGAGATCAATGTGGATTTGTGCAGTTTCCTACTTTTGGATTGAAAGCCTGGAAAAACACATTTTACTTCGACTTCAGTATGACTTATGTTGGAGCAGGAATGATCTGTTCCCATCTTGTCAACTTATCGTTGCTTCTTGGTGCTGTGCTGTCTTGGGGCATTATGTGGCCATTGATCAGGGGACTTAAAGGAGAGTGGTTCCCAGCAAATTTATCAGAAAGCAGCATGAAGAGTCTTAATGGTTACAAGGTTTTTGTATCCATTGCCTTGATTCTTGGTGATGGGCTTtacaattttctcaaaattctctattTCACTGCCAGAAATATCCATGCCACCTTGAAAAGGAGGAACCTTAAAACTATTTCAGAGAACCAGAATCAGCCCCATGATGATCTTAGACGGAATGAAGTGTTTGTTAGAGAAAGCATTCCTTTATGGTTGGCATGTGCAGGGTACACATTGTTCTCCATCATTTCTATCATTGTAATTCCTCTCATGTTTCCCCAGTTGAAGTGGTATTATGTAGTCGTTGCCTATCTGCTTGCACCCTCTCTTGGCTTCTGCAATGCTTACGGTGCAGGCTTAACTGACATGAACATGGCCTATAACTATGGGAAAGTGGCTCTATTTGTGCTTGCGGCTTTGGCTGGAAGAAACAATGGTGTAGTTGCTGGACTTGTGGGGTGTGGACTGATTAAATCTATTGTTTCCATCTCATCTGATTTGATGCACGATTTCAAGACTGGCCATCTCACCTTCACTTCCCCTCGTTCCATGCTTCTAAGCCAAGCAATTGGGACTGCAATAGGTTGTTTTACAGCTCCTCTCACATTCTTCCTCTTCTACAAGGCTTTTGATGTGGGTGATCCCAATGGTGAATACAAAGCTCCATATGCCATAATATACAGAAACATGGCAATTCTGGGTGTTCAAGGCTTTTCTGCTCTCCCCCACCATTGCTTGCAGCTCTGTTATGGTTTTTTTGCATTTGCCATAGCAGCCAACTTGGTGAGAGATATCAATCCTAAAAATATTGGGAAATGGGTTCCACTTCCAATGGCCATGGCTGTACCTTTCCTAGTAGGAGCTTACTTTGCAATTGACATGTGCGTGGGTAGTTTGGTCGTGTATGTTTGGCACAAGCTAAACAGCAGAAAGGCTGGTTTGATGGTTCCTGCAGTTGCTTCTGGTTTGATTTGTGGAGATGGTTTGTGGATTCTCCCTTCATCTATTCTTGCATTAGCAAAGGTTAAACCCCCAATGTGCATGAGCTTCTTGTCAACCAAGTA 2297 0.4266 MNSETHFVDHGILFPSSVPSLIHTLIQFQDPILAFCTSLSYLLGVCVSQLCKEAHSVVAGFSLHLEKNQVYNSFELKVVVRKLQTERKLRLDDSVITMGHITNEELKEIENFEREDKEEIRVEPEDLSRIAPWTKQITIRGLIASLLIGTIYSVIVMKLNLTTGLVPNLNVSAALLGFVFIRTWTKLLEKAKIVSTPFTRQENTIIQTCAVACYSIAVGGGFGSYLLGLNNRTYQQAGVDTQGNTPGSTKEPGIGWMTGFLFVTSFVGLLALVPLRKIMIIDYKLTYPSGTATAVLINGFHTPKGDKMAKKQVHGFMKFFSFSFVWAFFQWFYTGGDQCGFVQFPTFGLKAWKNTFYFDFSMTYVGAGMICSHLVNLSLLLGAVLSWGIMWPLIRGLKGEWFPANLSESSMKSLNGYKVFVSIALILGDGLYNFLKILYFTARNIHATLKRRNLKTISENQNQPHDDLRRNEVFVRESIPLWLACAGYTLFSIISIIVIPLMFPQLKWYYVVVAYLLAPSLGFCNAYGAGLTDMNMAYNYGKVALFVLAALAGRNNGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTFTSPRSMLLSQAIGTAIGCFTAPLTFFLFYKAFDVGDPNGEYKAPYAIIYRNMAILGVQGFSALPHHCLQLCYGFFAFAIAANLVRDINPKNIGKWVPLPMAMAVPFLVGAYFAIDMCVGSLVVYVWHKLNSRKAGLMVPAVASGLICGDGLWILPSSILALAKVKPPMCMSFLSTK 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01909 765 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 103 763 IPR045035 GO:0035673
Bva12g01909 765 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 131 747 IPR004813 GO:0035673
Bva12g01909 765 Pfam OPT oligopeptide transporter protein 136 748 IPR004813 GO:0035673
Bva12g01909 765 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL3 103 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01909 Bva-Chr12 15273149 15276547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01909 - - gmx:100795669 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01909 12 15273149 15276547 Bva06g03013 06 18733551 18737177 ECH
Bva12g01909 12 15273149 15276547 Bva12g01909 12 15273149 15276547 ECH