Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03013 ATGCTTCGGTTGATTTCAGCTGGTGGATTGGGGGATTCTCTTCTTATCTTCTTTTCCATTATTCAACGCAATCTGCAATCCAACTTGAAGgAGAACGAAATTGGgAGTATACGATTTCGTGATTACAAATTTAGAATGGGGCAAATAAACAATGGAGAGCTGAAAGAGATTGAGAGTTTCGAGAGAGAGGACGTGGAAGAGATTCGAGCTGAGCCAGAGGAGGTGAGTAGAATAGCACCATGGACAAAACAGATCACAATTCGAGGACTAATAGCCAGCTTACTGATTGGAATCATTTACAGTGTGATCGTAATGAAGCTGAACCTCACCACTGGGCTAGTCCCCAATCTGAATGTCTCAGCTGCTCTTCTTGGCTTTGTGTTCATCAGAACTTGGACTAAGCTGCTTGAGAAGGCTAAAATTGTTTCTAAACCATTCACTCGGCAGGAGAATACCATAGTCCAGACTTGTGCAGTTGCTTGCTATAGCATTGCAGTCGGAgGCGGTTTTGGGTCCTATCTCTTGGGTTTGAATAGTAAGACCTATCAGCAAGTTGGGGTTGACACAGAGGGAAATACTCCTGGGAGCACCAAGGAGCCTGGAATTGGTTGGATGACTGGTTTTCTCTTTGTGACAAGCTTTGTGGGGCTGTTGGCGTTGGTTCCTCTAAGAAAGATCATGATAATAGATTACAAATTGACTTATCCAAGTGGAACTGCTACTGCTGTTCTTATTAATGGATTTCACACTCCTAAAGGAGACGAGATGGCCAAGAAGCAGGTTCATGGTTTCATGAAATTCTTTGGAATTAGTTTCCTTTGGGCTTTCTTTCAGTGGTTCTATGCTGGTGGAGATCAATGTGGATTTGCGCAGTTTCCTACTTTTGGATTGAAAGCCTGGAAAAACACATTTTACTTTGACTTCAGTATGACTTATGTTGGAGCTGGAATGATCTGTTCCCATCTCGTCAACTTATCTTTGCTTGTTGGTGCTGTGCTTTCTTGGGGCATTATGTGGCCATTGATTGGGGGACTTAAAGGAGAATGGTTCCCTGCAGATTTATCCGAAAGCAGCATGAAGAGTCTTAATGGTTACAAGGTTTTTATATCCATTGCCTTGATTCTTGGCGATGGGCTTTACAATTTCCTCAAAGTTCTCTATTTCACTGCCAGAAATATCCGATCCTCCGCGAAAAGGAGGCACCCTAAAACTACAGTTTCAGAGAATCAGAAGCAGCCTCATGATGATCTTAGACGGAATGAAGTGTTTCTTAGAGACGGCATTCCTATATGGTTGGCATGTGCAGGGTATACATTGTTCTCCCTAATTTCCATCATCATAATCCCTCTCATGTTTCCCGAGTTGAAGTGGTATTATGTACTTGTTGCCTATCTGCTTGCACCCTCTCTTGGCTTCTGCAATGCTTACGGTGCAGGCTTAACTGACATGAACATGGCCTATAACTATGGCAAAGTGGCTCTCTTTGTGCTTGCCGCCTTGGCTGGAAAAAATAATGGTGTAGTTGCTGGACTTGTGGGGTGTGGCCTGATTAAATCCATTGTTTCCATCTCATCTGATTTGATGCATGATTTCAAGACTGGCCATCTCACCTTCACTTCCCCTCGTTCCATGCTTCTAACCCAAGCTATTGGGACTGCAATAGGTTGTGTTGTAGCTCCTCTCACATTCTTCCTCTTCTATAAGGCTTTTGACGTGGGTGATCCAAACGGTGAATACAAAGCTCCATATGCCATAATATACAGAAACATGGCAATTCTAGGCGTTGAAGGCTTTTCTGCTCTCCCCCACCATTGCTTGCAGCTCTGTTATGGTTTCTTTGCATTTGCCATAGCAGCAAACTTGGCGAGAGACGTTAATCCTAAAAATATTGGGAAATGGGTTCCACTTCCAATGGCCATGGCTGTGCCTTTCCTAGTTGGTGCTTACTTTGCAATTGACATGTGTGTGGGTAGTTTGGTTGTCTATGTCTGGCACATGCTAAACAGCAAGAAGGCAAGCTTGATGGTTCCTGCAGTTGCTTCTGGTTTGATTTGTGGGGATGGTTTGTGGATTCTCCCATCATCTATTCTTGCATTGGCAAAGATTCATCCGCCAATGTGCTTGAGAATCTTGTCAACCAACTAGTTGACAGAGAGACATTGACAGGAAATTGCTGTAGTTAGATTAGGATACGAAGAGCTGTTTAATTGCAGTTAGTTCATAAAgatgcaaacaaaaaagattttgacTTGTTTGAGCACAATAACCAATTTGAGTGCATCAGTCCAGACAACTAACGACAATGCCTAcgataaagaaaagaagattaaagATGAGTTGAAGAGAGATAGAAGTATGGACCATTCGAATTGAACGGTCTGCACTCCCCTATTGCACACTCCCTCAACGGAATTTTAAGAATGTAAAATTGTTATCAATAACGTCATCAAA 2451 0.4206 MLRLISAGGLGDSLLIFFSIIQRNLQSNLKENEIGSIRFRDYKFRMGQINNGELKEIESFEREDVEEIRAEPEEVSRIAPWTKQITIRGLIASLLIGIIYSVIVMKLNLTTGLVPNLNVSAALLGFVFIRTWTKLLEKAKIVSKPFTRQENTIVQTCAVACYSIAVGGGFGSYLLGLNSKTYQQVGVDTEGNTPGSTKEPGIGWMTGFLFVTSFVGLLALVPLRKIMIIDYKLTYPSGTATAVLINGFHTPKGDEMAKKQVHGFMKFFGISFLWAFFQWFYAGGDQCGFAQFPTFGLKAWKNTFYFDFSMTYVGAGMICSHLVNLSLLVGAVLSWGIMWPLIGGLKGEWFPADLSESSMKSLNGYKVFISIALILGDGLYNFLKVLYFTARNIRSSAKRRHPKTTVSENQKQPHDDLRRNEVFLRDGIPIWLACAGYTLFSLISIIIIPLMFPELKWYYVLVAYLLAPSLGFCNAYGAGLTDMNMAYNYGKVALFVLAALAGKNNGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTFTSPRSMLLTQAIGTAIGCVVAPLTFFLFYKAFDVGDPNGEYKAPYAIIYRNMAILGVEGFSALPHHCLQLCYGFFAFAIAANLARDVNPKNIGKWVPLPMAMAVPFLVGAYFAIDMCVGSLVVYVWHMLNSKKASLMVPAVASGLICGDGLWILPSSILALAKIHPPMCLRILSTN 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03013 714 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 78 696 IPR004813 GO:0035673
Bva06g03013 714 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 52 711 IPR045035 GO:0035673
Bva06g03013 714 Pfam OPT oligopeptide transporter protein 84 697 IPR004813 GO:0035673
Bva06g03013 714 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL3 52 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03013 Bva-Chr6 18733551 18737177 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03013 - - gmx:100795669 1167.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01909 12 15273149 15276547 Bva06g03013 06 18733551 18737177 ECH
Bva06g03013 06 18733551 18737177 Bva06g03013 06 18733551 18737177 ECH