Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01907 ATGTTCACATCCAGTCACTTGAACAGCAACAGTCACAGCAATAGCAACAACGACAGTCCCATCCTCACCGTCAGCGGCGGCAGCGGGTTCTGGTTAATTGCTACAGCGATGTCGCCGTCTGATTCGGCGGTGGTGTTCACGGCCTTCGCTGGAGTGGCTCTTGTAGCTGTAATTTTCTATGGTGCTAGTAGACGAAGTCACAATTCATCTTCGTCGTCTTCGAATTCCTCTCCTTCTTCATCGTCGTCATCATCTTCTTCGTCGTGGATCCATTTGCGTTCGGTTCTATTCGTTGTTACTTCTTCCTCACCAGCTTCATCTTGTTCACCCTCTGATCGgGGTCGGCTTAAATCACCATGGTCACGCAGGAAAAGGAAACATGCCCTTTCACCTCAGCTGTGGAGAAGCTTGTTTACTCAAGATGGGAGACTCAGAGATGGTGGAACTAAATTCTTGAAAAGAGTTCGTAGTGGAGGTGTTGATCCTAGCGTGAGGGCTGAAGTTTGGCCATTCCTACTTGGAGTTTATGACTTGGACAGCTCTAAGGAGGAAAGAGATGTTATAAGAAACAAGAATAGAAAGCAATATGAGAAACTCCGTAGACAAAGCCGCCAACTCCTAAAGCACTGCAATGGGAGCTTTAAGTTAAATGAAATTGGTGGAATCAGCTATGAAGGAGAGAGTGGAAGTCTTATTCAAGACTCAGGTTCCCCTAGTTCTGAAGATATAGCCAGTGCTAGGGAATCCCTTTCTAGTGAGGACGGGAGCCCAGGTGTTGAATACTCAGATGATCCATCCAGTGCATTGTTGGAAGAAGACGAAGTTTTGAATGCCAACAATGCTGACGCCTCTGCATTAGATACTGATTCCTCTGATTCAGACTCCTCAGAAGGTCCTGAGGTGATTCAGACTTTCCCCTCTGCTGATGGTCAGGAAGAGCTTGATCCCAAGGCAGCTTCGAATTCTCCTGCTCTACCATCAAAACTAAGAACTAATGAAGATTTTGCCACATGGCAGCGAATTATCCGACTTGATGCAGTACGTGCCAATGCAGAATGGATGCCTTACTCTCCCTCTCAAGCTACCGTATCAGAGACTAGGGCACACCGTTCTGCTGAGGCTGTTGGTTTGAAGGATTATAGTCATCTAGAGCCTGGCCGGATCTTCCACGCTGCCCGCCTAGTTGCCATTCTTGAAGCATATGCACTATATGACCCTGAAATTGGCTACTGTCAGGGTATGAGTGATTTACTTTCTCCTATAGTTTCTGTTATATCAGAAGATCATGAGGCTTTCTGGTGTTTTGTTGGATTCATGAAGAAGGCACGGCAGAATTTTAGGCTTGACGAGGTGGGTATTAGGAGACAACTGAACATCGTTGCAAAAGTTATCAAATTTAAGGACTCCCACCTTTATAGGCATCTAGAGAAGCTCCAGGCTGAGGattgcttttttgtttataggaTGGTGGTGGTACTGTTTAGAAGGGAATTGACGTTTGAACAAACTCTTTGCCTTTGGGAAGTAATGTGGGCAGATCAGGCAGCAATTAGGGCAGGTATTGGAAAATCTGCATGGAGCAGAATAAGGCAGCGAGCTCCACCAACAGATGAGTTATTGCTATATGCAATAGCAGCTTCAGTATTGCAGAGGAGGAAATTGATTATTGAGAAGTACAGCAGCATGGATGAAATTATTAGGGAATGCAATGGCATGGCTGGGCACCTTGATGTATGGAAGCTGTTAGATGATGCGCATAACTTGGTGGTCACCCTTCATGACAAAATAGAGACATCATTCCGATG 1805 0.4532 MFTSSHLNSNSHSNSNNDSPILTVSGGSGFWLIATAMSPSDSAVVFTAFAGVALVAVIFYGASRRSHNSSSSSSNSSPSSSSSSSSSSWIHLRSVLFVVTSSSPASSCSPSDRGRLKSPWSRRKRKHALSPQLWRSLFTQDGRLRDGGTKFLKRVRSGGVDPSVRAEVWPFLLGVYDLDSSKEERDVIRNKNRKQYEKLRRQSRQLLKHCNGSFKLNEIGGISYEGESGSLIQDSGSPSSEDIASARESLSSEDGSPGVEYSDDPSSALLEEDEVLNANNADASALDTDSSDSDSSEGPEVIQTFPSADGQEELDPKAASNSPALPSKLRTNEDFATWQRIIRLDAVRANAEWMPYSPSQATVSETRAHRSAEAVGLKDYSHLEPGRIFHAARLVAILEAYALYDPEIGYCQGMSDLLSPIVSVISEDHEAFWCFVGFMKKARQNFRLDEVGIRRQLNIVAKVIKFKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRQRAPPTDELLLYAIAASVLQRRKLIIEKYSSMDEIIRECNGMAGHLDVWKLLDDAHNLVVTLHDKIETSFR 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01907 601 MobiDBLite consensus disorder prediction 102 124 - -
Bva12g01907 601 MobiDBLite consensus disorder prediction 283 302 - -
Bva12g01907 601 PANTHER SMALL G PROTEIN SIGNALING MODULATOR 2-LIKE 68 596 - -
Bva12g01907 601 Pfam Rab-GTPase-TBC domain 393 513 IPR000195 -
Bva12g01907 601 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 143 474 IPR035969 -
Bva12g01907 601 MobiDBLite consensus disorder prediction 66 86 - -
Bva12g01907 601 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 68 596 - -
Bva12g01907 601 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 451 589 IPR035969 -
Bva12g01907 601 SMART tbc_4 156 537 IPR000195 -
Bva12g01907 601 MobiDBLite consensus disorder prediction 227 265 - -
Bva12g01907 601 Gene3D - 450 597 - -
Bva12g01907 601 ProSiteProfiles TBC/rab GAP domain profile. 159 514 IPR000195 -
Bva12g01907 601 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 315 446 - -
Bva12g01907 601 MobiDBLite consensus disorder prediction 228 256 - -
Bva12g01907 601 MobiDBLite consensus disorder prediction 283 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01907 Bva-Chr12 15264052 15268273 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01907 - - gmx:100793557 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01907 12 15264052 15268273 Bva06g03015 06 18740977 18745321 ECH
Bva12g01907 12 15264052 15268273 Bva12g01907 12 15264052 15268273 ECH